Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0641 ATGAAGAACCTGAGGGTTTGTTTCACTTACTTTTTTCCTGCAATCATTCTTGTTCTGCTTACTCCTTCCTCGGTTGCACAGCTATCAACAAGTGAGAATAGAATTCTATTCCAAGTTCAGAAGCTTCTTGAATATCCTCAAGCTCTTCAAGGGTGGACAAGATGGACCAACTTGTGCTTCCTCCCTCCCTCTTCTTCCCTCAAGATAGTTTGCTCAAATGGTCATTTGACAGAACTAACTATCATTGGAAACAAGACCTCCCCATCTTCACACATCCCCCAGGCAGGTTCCTGGACTTCCCTTCAAACACTTTCAGGAAAATTCTCCATCGATTCTTTCTTCACTGTCATGACAAAGCTTTCAAATTTGAAGGTGTTGTCCTTGGTGTCCTTGGGTTTGTGGGGTCCTTTACCATCTAAAATCAACAGGTTTTGGTCTCTGGAAGTGCTAAACATTAGCTCAAATTTCATTTATGGGGAAATTCCATCATCCATATCCTCAATGTTGAATCTAAGGAGTCTCGTTTTGGTTAATAATCTCTTCAATGGAAGTGTCCCTGATCTCCAGATATTAACTTCTCTTGAAGAGCTCAACTTGGGAGGTAACAAACTGGGTCCTGAATTCCCTTCAGTGGGAAAGAATATTGTCACTATAATCTTGAGAAATAATTCACTGAGATCTCGTATTCCTCCACAAATTGAGCACTTGGACAAACTTCAGGTATTTGATGTATCTTCCAATGATGTTTTTGGAAACATCCCGTCCTTTTTGATGTCTATGCCTTCCCTTCATTCCCTAAACTTGGCCGCAAACCATCTAAGTGGTAACCTCTCAGTGAATACGGCATGTAGTTCTACACTAACATTTGTGGATATCTCACACAACCTTCTGGTAGGAAAATTGCCTGCGTGCCTTGGTTCAATGTCTTCAAAGGCCACAGTACTATTTTCTGGAAATTGTTTGTCAACCAAAAGGTTAAATAATCAACATCCATCTTCTTTTTGCAAGAGAGAGGGAGCTTTAGCTGTTAAGCCTCCAGCTAAAAAACCGCAGAGTGATTCAAATTCGGGTGCCAAACTAGGCGTAGTGATTGGAATAATTGGAGGAGCTGTAGTAATTGCTGGACTTATGGTTTTTCTCATTGTGTTCATCTTTAGAAAGACCAATGGAGAAAGATCACATCATAAAATGGACAAATCTGTTGCTAATAAATATTTTGCCAGTGCATCTCCTGGACCAAACGGTACAAGACATATTCCTCAGGCCATGAAGCAAGCTGCACTTGGACTTCCACCATACCGTATTTTCACATCAGAGGAAATTGAAGATGCAACAAATAACTTTGACCCATCAAATTTAATAGAAGAGGGATCACAAGGACAGCTATATAAAGGTTGGCTCAGAGATGGTTCAGTGGTCCTAGTTAATTGTGTTAAAATAAGGCAGAAAGGTCTCCCCCACAGCATCATGCAGCAAATAGAGGTATTACCCAATTTGAGGCACAGGCACATGGTGAGTGTTCTAGGACACTGTATCATTACTGAACAGGAACATCCCCAAACAACAAGCACAGTCTTCATCGTATTTGAGCACATCTCAAATGTGTCATTAAGGGATCAACTTGCAGATGGGAGAAAGAGGGAAATGCTGAAATGGCCACAAAGAATGGCAATGAGCATAGGCATTGCAAGAGGAGTCCAGTTCTTACACACAGGAGTTGCTCCTGGCATATATGGCAACAATTTAAAGATTGAGAACATTCTGTTGGATGATAGTCTCAATGCAAAAGTCAGTAGATACAGTATTCCATTGCCATCCAAGAGTGCACATAATGAACACATTGCCACCAATCATATGGGCAGCACAAATGATGCAGAAAAGGAAGACATCTATCAGCTGGGAGTTATTCTTCTTGAAGTTATCACTGGCAAACAAATTGCTTCCCCTAGTGAAATAGAGGAGATGAAGGATGAGCTGGAGAATGGTTCATCTGAAGCAACATCAGTACTTAAAAGTGTAATTGACCCTTCACTGCGAGGAACTTATGCATATGAATCAATGAAGACTGCAATTCATATTACCATCAACTGTCTCTCCAAGGTCTCTAGCCAGCGTCCTTCAATAGAGGATGTTCTTTGGAATTTACAATACTCAATGCAAGTTCAAGAGTCATGGACCAGCAGTGGAAACCTCAGCACAAAGTTGTAA 2208 0.4094 MKNLRVCFTYFFPAIILVLLTPSSVAQLSTSENRILFQVQKLLEYPQALQGWTRWTNLCFLPPSSSLKIVCSNGHLTELTIIGNKTSPSSHIPQAGSWTSLQTLSGKFSIDSFFTVMTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPSSISSMLNLRSLVLVNNLFNGSVPDLQILTSLEELNLGGNKLGPEFPSVGKNIVTIILRNNSLRSRIPPQIEHLDKLQVFDVSSNDVFGNIPSFLMSMPSLHSLNLAANHLSGNLSVNTACSSTLTFVDISHNLLVGKLPACLGSMSSKATVLFSGNCLSTKRLNNQHPSSFCKREGALAVKPPAKKPQSDSNSGAKLGVVIGIIGGAVVIAGLMVFLIVFIFRKTNGERSHHKMDKSVANKYFASASPGPNGTRHIPQAMKQAALGLPPYRIFTSEEIEDATNNFDPSNLIEEGSQGQLYKGWLRDGSVVLVNCVKIRQKGLPHSIMQQIEVLPNLRHRHMVSVLGHCIITEQEHPQTTSTVFIVFEHISNVSLRDQLADGRKREMLKWPQRMAMSIGIARGVQFLHTGVAPGIYGNNLKIENILLDDSLNAKVSRYSIPLPSKSAHNEHIATNHMGSTNDAEKEDIYQLGVILLEVITGKQIASPSEIEEMKDELENGSSEATSVLKSVIDPSLRGTYAYESMKTAIHITINCLSKVSSQRPSIEDVLWNLQYSMQVQESWTSSGNLSTKL* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0641 735 SUPERFAMILY Protein kinase-like (PK-like) 429 715 IPR011009 -
Vra7g0641 735 SUPERFAMILY L domain-like 44 325 - -
Vra7g0641 735 Gene3D Phosphorylase Kinase; domain 1 416 519 - -
Vra7g0641 735 Gene3D Ribonuclease Inhibitor 213 345 IPR032675 -
Vra7g0641 735 ProSiteProfiles Protein kinase domain profile. 448 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g0641 735 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 6 728 - -
Vra7g0641 735 Gene3D Ribonuclease Inhibitor 29 212 IPR032675 -
Vra7g0641 735 PANTHER OS07G0166700 PROTEIN 6 728 IPR045272 GO:0004714|GO:0006468
Vra7g0641 735 Pfam Protein kinase domain 454 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g0641 735 Gene3D Transferase(Phosphotransferase) domain 1 532 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0641 Vra-Chr7 12073411 12077102 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0641 24 693 Miscellaneous Gene Families AT2G02780 47.695 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Vra7g0641 Pkinase 4.4e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0641 - - gmx:100803061 1216.83