Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0612 ATGGCGAAGAGCGAGTTAAAGGTGATTGGAAAATGGTCGAGTCCTTATGCTATGCGAGTGAAGATTGCCCTGAACATCAAAGCCCTTGAACATGAGCACTTTGAAGAAACGTTGAACCCCAAAAGCGACCTTCTTCTTCAATCCAACCCTGTGTATGGCAAAGTCCCAGTTCTCCTCCACCATGGCAGACCCATCTGTGAATCTTTGATCATAGTTCAATACATAGATGAAACATGGTCCACTGATCCTCCTATCCTCTCCTCCGATCCTCACGATAGAGCTCTTGCTCGCTTCTGGGCTGCTTACATAGATGATAGATGGTTTCCATCCATGAAAAGCATTATGACTGTTGAAGGAGAGGAGGAAAGGAAGCCATACTTTGAGGTGTTGGAAGAAGTACTTGAAAGGATGGAGGGTGCTTTCTGGAAATGCAGCAAAGGAAAGCCATATTTTGCAGGAGACAGGATTGGATTCCTTGACATTGCTTTTGGGTGCTTCCTGGGATGGCTCAGTGTGATAGAACATAGATATGAAAGGAAACTGCTGGTTGAAGCAAAGGCTCCTGCTTTGGTGAAATGGGCTGAGAGATTTGCTGCTGACCCTGCTGTCAAGGGGCTTATACCTGATACTGATAAGCTTGTTGAGATTTCCAAGTCTCTTCAGATCAAATGGAGAGCTGCAATTGGCAAGAACTAG 696 0.454 MAKSELKVIGKWSSPYAMRVKIALNIKALEHEHFEETLNPKSDLLLQSNPVYGKVPVLLHHGRPICESLIIVQYIDETWSTDPPILSSDPHDRALARFWAAYIDDRWFPSMKSIMTVEGEEERKPYFEVLEEVLERMEGAFWKCSKGKPYFAGDRIGFLDIAFGCFLGWLSVIEHRYERKLLVEAKAPALVKWAERFAADPAVKGLIPDTDKLVEISKSLQIKWRAAIGKN* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0612 231 CDD GST_C_Tau 90 218 IPR045074 GO:0004364|GO:0006749
Vra7g0612 231 Pfam Glutathione S-transferase, C-terminal domain 99 201 IPR004046 -
Vra7g0612 231 SUPERFAMILY GST C-terminal domain-like 77 219 IPR036282 -
Vra7g0612 231 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Vra7g0612 231 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Vra7g0612 231 SFLD Glutathione Transferase (cytosolic) 2 225 IPR040079 -
Vra7g0612 231 SFLD Main.3: Omega- and Tau-like 2 225 IPR045073 -
Vra7g0612 231 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 218 IPR045073 -
Vra7g0612 231 PANTHER GLUTATHIONE S-TRANSFERASE U17 5 218 - -
Vra7g0612 231 Gene3D - 86 228 - -
Vra7g0612 231 CDD GST_N_Tau 6 79 - -
Vra7g0612 231 Gene3D Glutaredoxin 1 85 - -
Vra7g0612 231 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 220 IPR010987 -
Vra7g0612 231 SUPERFAMILY Thioredoxin-like 6 108 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0612 Vra-Chr7 11374987 11376082 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0612 1 220 Glutathione S-transferase Gene Family AT1G10370 55.656 1.92e-87 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0612 K00799 - cam:101508281 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1296 11 15886721 15887912 Vra7g0612 7 11374987 11376082 PCT
Vra7g0612 7 11374987 11376082 Vra11g1297 11 15909922 15911131 PCT