Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0599 ATGTCGCCGGAAAGAGACGTCATATCCGCCACGCCGGGAGCGTTCCGGCTACGGTGGGACGTGTTCTTGAGCTTCAGAGGCACCGACACGCGCGGCACTATCACGAAAGGTCTGTACAAGAGTCTGCAGGGGCGTGGGGTTCGCGTGTTCCTGGACGACGAGGGGTTGGAGCGTGGGGAAGCGGTAGCGAATGGGCTGATGGAGGGAATTGATGACTCTGCAGCGTTCATTGTCATCATATCTGAAAACTACGCTTCTTCACACTGGTGTCTGGAGGAACTCACCAAGATTTGCGACACCGGTAGACTCCTCTTGCCCGTTTTCTACCGGGTTGACCCCTCGCAGGTCCGACACGTATCGGGTCCCTTCGGATCGGGTTTCGAATCGCATGAAAAAAGGTTTGAGAAAAATACGGTTTCAAAATGGAAGGAAGCGTTGAAGAAAGTTGGTGGAGTTGCTGGTTGGGTTTTTAATCACAGTGAGGAAGATGATCTGATTCAGCGTTTGGTGCGAAGGGTGTTGAAAGAGTTGAGTAACACTCCTATGAGTGTGCCTGAGTTTGCAGTGGGACTTGATGAACGTGTTGAGAAGGTGATGGAGGTTTTGCAAGTTCAATCCAATGGTGTCAAGGTTTTGGGGTTGTATGGGATGGGTGGGGTTGGTAAGACAACCCTGGCCAAGGCCCTTTTCAATGCCCTTGTTAACCGTTTTCAGCACCGTTGCTTCATTTCCGACGTTAGACAAGTTTCATCAAAACACGATGGTTTGGTTTCCCTTCAAAGCAAAATCATTAAAGACCTTTTTCCTGGAGAAGGATCTCCCTCCATCGGTAATGTCAATGTTGGTATTTCTGCTATCAAAGGGAGAGTTAGTGAGAATCGAGTTTTACTAGTCTTGGATGATGTCGATGAAGTGAAGCAGCTTGATGCTTTGATTGGTAATAGGGAATGGTTTTACGATGGAAGCTGTGTGATAATCACAACACGGGATACAAAAGTTCTAACTCAGAATCATGTGACTGTGTCGTATGAAGTTAGAGAGTTATTGTATGGTTCTGAAGCTCGAGAGTTATTCAGTTATCATGCACTGAGAAGAAGTGCACCACCAGAAAATCTTCAGAGTCTATCAGAGGAGATAATATCCCTGACGGGAGGAATGCCTTTGGCTCTGGAAGTGTTTGGTTCGTTTTTGTTTGGTAAGAGGAGGGAGGAGGAATGGGAGGATGCTGTGAAGAAGCTAAGGCTAATTCGCCCTCACCATCTTCAGGATGTGTTGAAGATAAGTTACGATGCTTTAGATGAAGAAGAGAAGTGTATATTCCTTGATATTGCTTGTTTGTTTGTTCAAATGGAAATGAAGCGTGATGGTGTGATTGATGTGTTAAGAGGTTGTGGTTTTAGGGGTGAGATTGCTATCACGGTACTGGTGCAGAAGTGCTTGATGAAAATCACTCCGGATAATACTGTGTGGATGCATGATCAAATTAGAGACATGGGAAGGCAAATAGTCATGGATGAAAGCTTTGTGGATCCTGGTTCGCGTAGTAGACTGTGGGATCGAGCTCAAATCATGACTGTGTTGAAGGGTCACAAGGGAACTAGATGCGTTCAAGGGATTGTACTCGATTTTGAGGAAGAAAGAATTTATAAGGGAAAGGTCGGATCAGTTTTTCCGAAGAAGTTTCAATGGAGACCAAGTTTAAGAAATATATCATGTTACATCAAACAATGCCTTAATAAGAATCATCCTGAACCTCAAGCAGAGGAAAACACAGAGTTTGTACTTCACACGAAATCCTTTGAACCAATGGTTAATCTGAGACAGCTTCAGATCAACAATCTGAAATTACAGGGCAAGTTTCTTCCATCTGAACTGAAGTGGCTACAATGGCAAGGGTGCCCTTTAGAACGCATGCCTTTGAAATCTTGGCCAGGAGAACTGGCTGTCCTTGATCTCCAAAACAGCAAGAAAATGAAAACCTTGTGGGGATGGAATGGTTACAACAAGGTGCCACAGAAGTTAATGGTCTTGAACCTCTCCAACTGCATCCAACTCACTGCTATACCTGATTTATCTGGGTGTCAATGTCTAGAGAAGATTGATTTGGAGAACTGCATTAATCTAACTAAGATTCATGAATCAATTGGTAGTTTGAGTACCTTGCGTAGTTTAAATTTAACGCGTTGTTCAAGCCTTATCAACCTTCCCATTGATGTCTCGGGGCTAAAACAACTGGAGAGTCTTTTTCTTTCTGGCTGCTCCAAGTTAAAATCTTTGCCAGAAAACATTGGAATCCTGAAATCCTTGAAAGCACTTCATGCTAATGACACTGCTATAGCAGAGTTGCCCCTGTCCATTTTTCGCCTCACGAAGCTTGAGCAGCTTGTTTTAGAACGTTGCCAATATTTGAGAAGGCTACCTAATTCTCTAGGACACCTATGTTCTTTGCAAGAATTATCTCTATATCAATCTGGGTTGGAAGAATTACCTGAGTCTGTGGGATCGTTAAATAACCTGGAGACACTCAATTTGAGGGGGTGTGAATCTCTCACTGTTATTCCTGATTCTGTAGGGAATCTCATGTCATTGACAGAACTTCTGGTTGATAGAACTGCAATTAAGGAACTTCCTACAACTGTTGGTTCTTTATCTTACCTGAGGGAATTATCAGTTGGAAACTGTAAACTTCTCACCCAATTGCCGAATTCAATTAAAACGCTGGCCTCAGTTGTGGAACTTCAGTTAGATGGAACAGCCATCACAAATTTGCCAGATGAGATTGGAGAGATGAAGCTACTGAGGATACTTAACTTGATGAATTGTAAAAATCTTGAATACTTACCAGAATCTATTGGCCACCTAGCATCTCTTACTACATTGAACACGGTCAATGGAAATATCAAAGAATTGCCAGAATCCACTGGACGGCTGGAAAATCTTGTCGACTTAAGATTGAACAAATGCAGAATGCTCAGAAAGCTTCCAGCTTCTATAGGAGATTTGAAATCTCTATATCACATTTTCATGGAGGAAACATCTGTGTCAAGCTTACCTGAAAGCTTTGGGATGCTGTCAAGCTTGAGAACATTGAAAATGGCAAAGAGGCCTGAATTATATACCAATGAAGGTAGCTTCCTTGCAGAACCTGAAGAGAACCATAGCCCTTTTGTACTAACATCTTCCTTCTGCAATCTGACCTTGTTAACTGAGCTTGATGCCCGTGCAAGGAAAATATCTGGGAAAATTCCTGATGAATTTGAGAAGTTGTCACTATTGGAGACTTTGAAATTAGACAGGAATGATTTTCACAGCCTGCCTTCCAGTTTGAAGGGCCTTTCTATCCTCAAAGTCCTTTCACTGTCAAACTGCACTCAGCTGAACTCTCTCCCCTCACTTCCTTCAAACCTGATTAAGCTGAATGCTCAAAACTGTTCTTTATTAGAAACTATCCATGACATGTCAAATTTAGAGAGCCTGCAGGAGTTGAATCTCACAAACTGTGTAAAAGTGGGGGATATTCCGGGTCTTGAAAGCTTGAAGTCCTTAAGAAGGATGTACCTGAGTGGTTGCATTGCATGCTCCTCACAAATACGAAAGAGACTTTCGAAGGTTGCACTCAGGAATTTACAGAACTTAAGCATGCCTGGAAGCAAATTACCTGAATGGTTTTCTGGGCAAACTGTGAGCTTTTCCAAGCGTAAAAATCTTGAGCTAAAGAGTATACTTGTTGGTGTTATTATTTCAATCAACCATAGCATTGACATACCCAACATGAAGAGAGATGATATGCCAGGCTTGATTGATGTTGAAGCAAATGTTCTCAAAGGGGGAAGAACTCTGTTTAAGACTGTGTTAAACATCTGTGGGGTGCCTAGAACAGATGATGAACACATGCACTTGTGTAGGTTCCATGATTACCATCAGCTGGTAGTCTTTCTAAAAGATGCTGATACATTTTCTGTGAGCAAGAGAAATCCACCTTTTGATACGGGGTTGGAATTAAGAAAATGTGGGGTCTATTTAATCTTTGAAGGAGATGATGATTATGATGGAGGGGAAGAATCATTGGACAAAGGCCTACAATCTGTCTCAGAAAAATTAGCCAATTTTTTCAGCACTCCTGAAGGTGGTGATCAGGTGAGTGTCAATGGAATTGGACATGCTGGAACTTGA 4173 0.4266 MSPERDVISATPGAFRLRWDVFLSFRGTDTRGTITKGLYKSLQGRGVRVFLDDEGLERGEAVANGLMEGIDDSAAFIVIISENYASSHWCLEELTKICDTGRLLLPVFYRVDPSQVRHVSGPFGSGFESHEKRFEKNTVSKWKEALKKVGGVAGWVFNHSEEDDLIQRLVRRVLKELSNTPMSVPEFAVGLDERVEKVMEVLQVQSNGVKVLGLYGMGGVGKTTLAKALFNALVNRFQHRCFISDVRQVSSKHDGLVSLQSKIIKDLFPGEGSPSIGNVNVGISAIKGRVSENRVLLVLDDVDEVKQLDALIGNREWFYDGSCVIITTRDTKVLTQNHVTVSYEVRELLYGSEARELFSYHALRRSAPPENLQSLSEEIISLTGGMPLALEVFGSFLFGKRREEEWEDAVKKLRLIRPHHLQDVLKISYDALDEEEKCIFLDIACLFVQMEMKRDGVIDVLRGCGFRGEIAITVLVQKCLMKITPDNTVWMHDQIRDMGRQIVMDESFVDPGSRSRLWDRAQIMTVLKGHKGTRCVQGIVLDFEEERIYKGKVGSVFPKKFQWRPSLRNISCYIKQCLNKNHPEPQAEENTEFVLHTKSFEPMVNLRQLQINNLKLQGKFLPSELKWLQWQGCPLERMPLKSWPGELAVLDLQNSKKMKTLWGWNGYNKVPQKLMVLNLSNCIQLTAIPDLSGCQCLEKIDLENCINLTKIHESIGSLSTLRSLNLTRCSSLINLPIDVSGLKQLESLFLSGCSKLKSLPENIGILKSLKALHANDTAIAELPLSIFRLTKLEQLVLERCQYLRRLPNSLGHLCSLQELSLYQSGLEELPESVGSLNNLETLNLRGCESLTVIPDSVGNLMSLTELLVDRTAIKELPTTVGSLSYLRELSVGNCKLLTQLPNSIKTLASVVELQLDGTAITNLPDEIGEMKLLRILNLMNCKNLEYLPESIGHLASLTTLNTVNGNIKELPESTGRLENLVDLRLNKCRMLRKLPASIGDLKSLYHIFMEETSVSSLPESFGMLSSLRTLKMAKRPELYTNEGSFLAEPEENHSPFVLTSSFCNLTLLTELDARARKISGKIPDEFEKLSLLETLKLDRNDFHSLPSSLKGLSILKVLSLSNCTQLNSLPSLPSNLIKLNAQNCSLLETIHDMSNLESLQELNLTNCVKVGDIPGLESLKSLRRMYLSGCIACSSQIRKRLSKVALRNLQNLSMPGSKLPEWFSGQTVSFSKRKNLELKSILVGVIISINHSIDIPNMKRDDMPGLIDVEANVLKGGRTLFKTVLNICGVPRTDDEHMHLCRFHDYHQLVVFLKDADTFSVSKRNPPFDTGLELRKCGVYLIFEGDDDYDGGEESLDKGLQSVSEKLANFFSTPEGGDQVSVNGIGHAGT* 1391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0599 1390 Pfam TIR domain 19 183 IPR000157 GO:0007165
Vra7g0599 1390 SMART till_3 18 152 IPR000157 GO:0007165
Vra7g0599 1390 Gene3D Ribonuclease Inhibitor 965 1041 IPR032675 -
Vra7g0599 1390 PRINTS Disease resistance protein signature 211 226 - -
Vra7g0599 1390 PRINTS Disease resistance protein signature 289 303 - -
Vra7g0599 1390 PRINTS Disease resistance protein signature 383 397 - -
Vra7g0599 1390 PRINTS Disease resistance protein signature 834 850 - -
Vra7g0599 1390 Pfam NB-ARC domain 193 415 IPR002182 GO:0043531
Vra7g0599 1390 Gene3D - 16 173 IPR035897 -
Vra7g0599 1390 SUPERFAMILY L domain-like 490 924 - -
Vra7g0599 1390 Gene3D - 349 433 IPR042197 -
Vra7g0599 1390 Gene3D - 174 343 IPR027417 -
Vra7g0599 1390 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 155 IPR035897 -
Vra7g0599 1390 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 443 IPR027417 -
Vra7g0599 1390 Gene3D Ribonuclease Inhibitor 772 964 IPR032675 -
Vra7g0599 1390 Gene3D Ribonuclease Inhibitor 589 771 IPR032675 -
Vra7g0599 1390 Gene3D Ribonuclease Inhibitor 1050 1244 IPR032675 -
Vra7g0599 1390 PANTHER TMV RESISTANCE PROTEIN N-LIKE 16 1332 - -
Vra7g0599 1390 SMART LRR_typ_2 742 764 IPR003591 -
Vra7g0599 1390 SMART LRR_typ_2 860 883 IPR003591 -
Vra7g0599 1390 SMART LRR_typ_2 954 977 IPR003591 -
Vra7g0599 1390 SMART LRR_typ_2 813 836 IPR003591 -
Vra7g0599 1390 SMART LRR_typ_2 1112 1139 IPR003591 -
Vra7g0599 1390 SMART LRR_typ_2 907 930 IPR003591 -
Vra7g0599 1390 SMART LRR_typ_2 1089 1111 IPR003591 -
Vra7g0599 1390 SMART LRR_typ_2 766 789 IPR003591 -
Vra7g0599 1390 ProSiteProfiles TIR domain profile. 17 177 IPR000157 GO:0007165
Vra7g0599 1390 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 1332 IPR044974 GO:0006952
Vra7g0599 1390 SUPERFAMILY L domain-like 898 1224 - -
Vra7g0599 1390 SMART LRR_CC_2 694 721 IPR006553 -
Vra7g0599 1390 SMART LRR_CC_2 836 863 IPR006553 -
Vra7g0599 1390 SMART LRR_CC_2 930 957 IPR006553 -
Vra7g0599 1390 SMART LRR_CC_2 1156 1182 IPR006553 -
Vra7g0599 1390 SMART LRR_CC_2 883 910 IPR006553 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0599 Vra-Chr7 11125502 11131728 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0599 790 983 WRKY Transcription Factor Family AT4G12020 33.846 2.51e-10 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0599 - - gmx:100786934 2120.51