Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0598 ATGGTAGCCATTGTTGCTTCTTACAGTGTCTTTCCGAGTAAAGAAACTCCCAAAGGTCAATTATGGTTATCAGATAATGACCAAGTCGTGCGTTCAGGTCACACACCCACTATCTATGTATACCAAGCAAAACACAATGATGGCACCACCCAGAGGTTGATAAACTCTCTTGCTCAGATTTTAGTGCCCTACTACCCACTTGCTGGCAGGTTGAGCTTAGCAGAAACTGGTCGAATTCAAGTGGATTGCAATGCCAAAGGAGTGACTTTTATTGAAGCCGAAACCACAAAATCATTGGCTGATTATGGAGACTTTTCACCTTCTGATTCTGTCAGGGAGCTTGTTCCAAAGATTGATTACACTCGACCCATAGAGGAAATTCCTTTGTTGCTTGTGCAATCCACAAGATTCCATGGTGGTGAAGGTTTTGTCATTGGAGTGGCTTTCTGTCACCCTATGGGTGATGGGTTTGGTGGCATTCAGTTCATCAATTCCTGGGCAAAACTGGCTCGTGGAGAGACACTTGAGCCACATGAATTGCCCTACCTTGATAGAACAATACTCAAACTCCAACACTCACCAACATCACCGTGCTTTGATCACCCCGAGTTGAGGCCTCTACCGCTAAAACTAGGAAGCTCTGACATCAACGCTGAGGAAAGCAAGAAGACAAGGGCTGTGCTACTGAAACTGACGCAAGAACAGGTGCAGAAGCTGAAGAATGAGGCGAATGAAGAACCCTTGAAAGAAGGGGTGAGAGCTTATAGCAGATTTGAAGCTATTGCAGGTCATATATGGAGATGTGCAAGTAAGGCTCGTGAGCTTGAAGAGAAGCAAGAAACGGTGGTTCGGTTCAATGCTGATATCCGTAGCAGACTGATTCCTCCTCTTCCTAGGAATTACTTTGGGAATGCTTTGACAGCAACAGTGTCACCGAAATGCTATGTTGGAGAAATAGTGTCAAAGCCTTTGAGCTATGCTGCAGGAAATGTAAGAGAAGCGATTGAAAAGCTTAGTAATGAGTACATAAGGTCACAACTTAGGATTGTGTTAGGTGAGGAGCAATTGGATTGCATAAGGGGTTTGTTCTTGGGACAAGGAGAGCGTAGAAATGTCCCTTTTGCAGGGAATCCGAATCTTCAAATCACAAGCTGGATGAGCATGCCAGTGTATGAAGCAGATTTTGGATGGGGAAAGCCTGTGTTTTTCGGGTTGGCATATGTTGCTCCACAAGATAGGGCTGTAATTCTTCTGAGTCCAGATGGTGATGGTTCCATTATTGTATCCATGCACTTCCAAGAACTTCATTTGGAGCTTTTCAAGAAATTTTTCTACCAGAGTTTATGA 1347 0.4417 MVAIVASYSVFPSKETPKGQLWLSDNDQVVRSGHTPTIYVYQAKHNDGTTQRLINSLAQILVPYYPLAGRLSLAETGRIQVDCNAKGVTFIEAETTKSLADYGDFSPSDSVRELVPKIDYTRPIEEIPLLLVQSTRFHGGEGFVIGVAFCHPMGDGFGGIQFINSWAKLARGETLEPHELPYLDRTILKLQHSPTSPCFDHPELRPLPLKLGSSDINAEESKKTRAVLLKLTQEQVQKLKNEANEEPLKEGVRAYSRFEAIAGHIWRCASKARELEEKQETVVRFNADIRSRLIPPLPRNYFGNALTATVSPKCYVGEIVSKPLSYAAGNVREAIEKLSNEYIRSQLRIVLGEEQLDCIRGLFLGQGERRNVPFAGNPNLQITSWMSMPVYEADFGWGKPVFFGLAYVAPQDRAVILLSPDGDGSIIVSMHFQELHLELFKKFFYQSL* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0598 448 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 3 446 - -
Vra7g0598 448 Gene3D - 1 206 IPR023213 -
Vra7g0598 448 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 446 - -
Vra7g0598 448 Pfam Transferase family 1 445 - -
Vra7g0598 448 Gene3D - 213 447 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0598 Vra-Chr7 11019316 11021265 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0598 2 446 Monolignol Biosynthesis Gene Families AT5G48930 38.255 1.44e-103 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0598 K13065 - gmx:100779814 701.049