Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0593 ATGGTATACTTCCAAATTCATGATCCTCTGAAGGAGTTCATCAAAATATGTATTTTTCTTAAATGGAGTAAATTGTTGCTCAGCAGCTTGCCCAGATTGGCTTTGATCCATTCAAAGGAGATCACTTCGAAGATCTATATTAGCAGGGGGTCATCCTTAGGGAATAGTAGCCGTCATTCATTTTCAGTTTCCTTCGGTTTACCCACTGGAGTTAACGTTTCTGATCCTGAACATGAAAGCTCAACGCCCAAAGAAAAAGCACCAGAGGTTCCACTCAGCCGCCTTGCTTCCCTTAACAAGCCAGAGATTCCAGTTCTTCTGCTTGGATGTGTTGCTGCCATAATAAATGGTGTTATACTTCCAATATTTGGCCTGCTGGTTTCCAGTGTCATCAAGACATTTTATGAACCATTTGATAAGATGAAGAAGGACTCCCACTTTTGGGCACTGATGTTTATGACCCTTNGTATTGTATCGTTTCTCATAATTCCTGCCCGAGGATACTTTTTCTCCGTGGCAGGAAGTAAGTTAATCCAACGTATCAGGCTAATGTGTTTCGAGAAGGTTGTCAACATGGAGGTTGGTTGGTTTGATGAGCCTGAAAACTCAAGTGGTTCAGTAGGTGCAAGGCTTTCAGCAGATGCTGCTTCAGTGCGTGCCCTTGTTGGTGATGCCCTGGGACTAGTGGTTCAAAATTTAGCCTCAGCAGTGGCCGGTTTGATCATTGCTTTTGTCGCATCTTGGCAACTGGCACTAATTATTCTTGTCATGATTCCCTTGATTGGAGTAAATGGATATGTTCAAATGAAATTCATGAAGGGATTCAGTGCAGATGCAAAGATGATGTACGAAGAAGCAAGCCAAGTTGCTAATGATGCAGTTGGACGCATAAGAACGGCCGAGCTTTGTGGTCGAGGTTATCCTCTACAGATCGAGCTTTGCAGCCGAGGCAATTCGACCATCGCTCACTTGGCTCTTGCTAGTTTATCCGCTTTTTGGGACATCCTATGGAATCTTGGAACTCGACCAATTTTGCATTTTGGTGTAGCCTGCGATATCTACGTTGACCAGGCTCTCGCTCCTATTTGGATTGGAGGGAGCGTTCGTGATTTTCCTCTGTCCTACGTCGGGTTAGCCTGCTTCGGTGTCTTCGAGCCCAGCCTCGATCATGTTCAAAGTGGCGAGAACATCCTCGAGTGCCTTTTACTCTATACTCGGTCGACCTGCTCTGATCTCCTTGAGCTGGACATTGAGGGGAGCGGTCCCAGCTCCCAAGTGAATCTCGTCGAGTTAGTGGGCTATCTCTCGTCCAAGAATTCTAGTGGTGTCTTCTTGGGAATCAAGGCGAGGTTGGAGAGATGA 1362 0.4567 MVYFQIHDPLKEFIKICIFLKWSKLLLSSLPRLALIHSKEITSKIYISRGSSLGNSSRHSFSVSFGLPTGVNVSDPEHESSTPKEKAPEVPLSRLASLNKPEIPVLLLGCVAAIINGVILPIFGLLVSSVIKTFYEPFDKMKKDSHFWALMFMTLXIVSFLIIPARGYFFSVAGSKLIQRIRLMCFEKVVNMEVGWFDEPENSSGSVGARLSADAASVRALVGDALGLVVQNLASAVAGLIIAFVASWQLALIILVMIPLIGVNGYVQMKFMKGFSADAKMMYEEASQVANDAVGRIRTAELCGRGYPLQIELCSRGNSTIAHLALASLSAFWDILWNLGTRPILHFGVACDIYVDQALAPIWIGGSVRDFPLSYVGLACFGVFEPSLDHVQSGENILECLLLYTRSTCSDLLELDIEGSGPSSQVNLVELVGYLSSKNSSGVFLGIKARLER* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0593 453 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 107 299 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Vra7g0593 453 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 52 303 IPR039421 -
Vra7g0593 453 CDD ABC_6TM_Pgp_ABCB1_D2_like 96 299 - -
Vra7g0593 453 Pfam ABC transporter transmembrane region 106 299 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Vra7g0593 453 SUPERFAMILY ABC transporter transmembrane region 94 305 IPR036640 GO:0005524|GO:0016021
Vra7g0593 453 Gene3D ABC transporter type 1, transmembrane domain 73 310 IPR036640 GO:0005524|GO:0016021
Vra7g0593 453 PANTHER ABC TRANSPORTER B FAMILY MEMBER 4-LIKE 52 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0593 Vra-Chr7 10837948 10847227 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0593 47 299 Calmodulin-binding Proteins AT2G36910 30.888 3.17e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0593 K05658 - vra:106766050 871.307