Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0585 ATGCCGTCTCACGCGGATCTGGAGCGTCAGATCGAGCAGCTAATGGAGTGCAAGCCTCTGACGGAGTCGGAGGTGAAGACGCTGTGCGATCAAGCGAGGGCGATTCTGGTGGAGGAGTGGAACGTGCAACCGGTGAAGTGCCCCGTCACCGTCTGCGGCGATATTCACGGTCAGTTCTACGATCTCATCGAGTTGTTTCGGATTGGAGGGAGCACACCCGATACCAATTATCTCTTCATGGGTGATTATGTAGATCGTGGGTACTATTCAGTGGAGACTGTTTCTCTTTTGGTGGCTTTGAAAGTTCGTTATCGTGATAGAATTACAATTCTCAGGGGAAATCATGAAAGCCGTCAAATTACTCAAGTGTATGGGTTCTACGATGAATGCTTGAGAAAATACGGAAATGCCAATGTCTGGAAATACTTTACAGACTTGTTTGATTATTTACCTCTGACTGCCCTCATTGAGAGTCAGGTTTTCTGCTTGCATGGAGGTCTCTCACCTTCTTTGGATACGCTGGATAACATCAGGGCATTGGATCGTATACAAGAGGTTCCACATGAAGGACCAATGTGTGATCTATTGTGGTCTGACCCTGATGATCGCTGTGGATGGGGAATATCTCCCCGTGGGGCAGGATACACATTTGGACAGGATATTGCTACTCAGTTTAATCATACCAATGGTCTCTCCCTGATATCTAGAGCTCATCAGCTTGTTATGGAAGGATACAATTGGTGCCAGGACAAGAATGTGGTTACCGTATTTAGCGCTCCAAATTACTGTTACCGATGTGGGAATATGGCTGCCATACTAGAAATAGGAGAGAATATGGATCAGAGTTTTCTTCAGTTTGATCCAGCTCCCAGGCAAATTGAGCCTGACACCACACGCAAGACTCCAGATTATTTTTTGTAA 921 0.4625 MPSHADLERQIEQLMECKPLTESEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGSTPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIATQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMDQSFLQFDPAPRQIEPDTTRKTPDYFL* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0585 306 SMART pp2a_7 20 290 IPR006186 GO:0016787
Vra7g0585 306 Pfam Calcineurin-like phosphoesterase 48 239 IPR004843 GO:0016787
Vra7g0585 306 SUPERFAMILY Metallo-dependent phosphatases 6 293 IPR029052 -
Vra7g0585 306 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 1 306 - -
Vra7g0585 306 ProSitePatterns Serine/threonine specific protein phosphatases signature. 111 116 IPR006186 GO:0016787
Vra7g0585 306 Gene3D - 2 306 IPR029052 -
Vra7g0585 306 CDD MPP_PP2A_PP4_PP6 6 290 - -
Vra7g0585 306 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 306 - -
Vra7g0585 306 PRINTS Serine/threonine phosphatase family signature 48 75 IPR006186 GO:0016787
Vra7g0585 306 PRINTS Serine/threonine phosphatase family signature 77 104 IPR006186 GO:0016787
Vra7g0585 306 PRINTS Serine/threonine phosphatase family signature 110 134 IPR006186 GO:0016787
Vra7g0585 306 PRINTS Serine/threonine phosphatase family signature 145 171 IPR006186 GO:0016787
Vra7g0585 306 PRINTS Serine/threonine phosphatase family signature 174 201 IPR006186 GO:0016787
Vra7g0585 306 PRINTS Serine/threonine phosphatase family signature 230 250 IPR006186 GO:0016787
Vra7g0585 306 PRINTS Serine/threonine phosphatase family signature 252 268 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0585 Vra-Chr7 10035007 10041473 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0585 49 225 Calmodulin-binding Proteins AT5G63870 36.916 2.08e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0585 K04382 - gmx:100783950 633.254