Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0583 ATGAACCAAACCAAACCTAAAATGTGTACGGCGGAGAAAGACGGGATCATGCTCTTCGGCGTGCGCCTCACCGTACCCAATAACAACCCCACCGTTTTCAGAAAGAGTGCCAGCATGAACAATCTCTCCCCAAACTCTGAATCGCCTCCGCCGCACCATCCCAATGCGGGCTACGCCTCAGACGACGTCGTTCACCTCTGCCGTCGCACGCGCAAGCGAGGGATTCCGTGGACGGAGGAGGAGCACAGGCAGTTCCTGTTGGGATTACAGAACGTTGGGAAAGGAGATTGGAGAGGAATTTCTAGAAATTTCGTCAAGACTCGAACGCCCACTCAGGTCGCTAGTCACGCTCAAAAGTATTTTCTCCGCCGTCACACTCACAATCGCCGTCGCCGGAGATCTAGTCTCTTCGATATCACCACCGACTCGGTGAAGGAAGAGGAACAAGCGGTGCCGTCAGCTAGGTCGAAACCGGTTTTACCGCCACCTCCGTCTTTGAAAATGGCTGAGTTGGACTTGAATGGGAGGTCGCTCTCGCTGAAGCTGAGGTTGCCGGAGCCGGAGGAGCCGTCGCCGGTGACTTTTGAGGTTGTGTCTAGTGGGAATTTGAGCGGTGACGTGGACATGATTAGTGTTGCTTGA 642 0.5452 MNQTKPKMCTAEKDGIMLFGVRLTVPNNNPTVFRKSASMNNLSPNSESPPPHHPNAGYASDDVVHLCRRTRKRGIPWTEEEHRQFLLGLQNVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRHTHNRRRRRSSLFDITTDSVKEEEQAVPSARSKPVLPPPPSLKMAELDLNGRSLSLKLRLPEPEEPSPVTFEVVSSGNLSGDVDMISVA* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0583 213 CDD SANT 76 121 IPR001005 -
Vra7g0583 213 SUPERFAMILY Homeodomain-like 70 124 IPR009057 -
Vra7g0583 213 MobiDBLite consensus disorder prediction 133 152 - -
Vra7g0583 213 Gene3D - 75 126 - -
Vra7g0583 213 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 125 IPR017930 -
Vra7g0583 213 PANTHER OS01G0187900 PROTEIN 7 156 - -
Vra7g0583 213 MobiDBLite consensus disorder prediction 32 46 - -
Vra7g0583 213 ProSiteProfiles Myb-like domain profile. 69 121 IPR001005 -
Vra7g0583 213 PANTHER TRANSCRIPTION FACTOR KUA1 7 156 - -
Vra7g0583 213 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 72 123 IPR006447 GO:0003677
Vra7g0583 213 Pfam Myb-like DNA-binding domain 76 121 IPR001005 -
Vra7g0583 213 MobiDBLite consensus disorder prediction 131 165 - -
Vra7g0583 213 MobiDBLite consensus disorder prediction 32 59 - -
Vra7g0583 213 SMART sant 73 123 IPR001005 -
Vra7g0583 213 ProSiteProfiles SANT domain profile. 77 125 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0583 Vra-Chr7 9977153 9978300 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vra7g0583 Myb_DNA-binding 3.4e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0583 - - gmx:778091 254.603