Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0581 ATGATGCAGGTAACATTGATTCATCTAGAGGATAGGCCTCATCCTGGGGCTTTTAATGTTATTCAAGAATTGCAAGATGAAGCAGAGTTTCGTGTGATTATGTTAACCGGAGATCACGAGTCTAGTGTCAAGAGAGTTGCAAGTGCTGTGGGCATCAAAGTGTTTCATTGCAACCTGAAGCCTGAAGATAAGTTGAGTCATGTGAAGGATACATCAAGGGATATGGAGCAGCGGAATGGAATTCAGTGGAAGAGAATGAGAGTTCTAGCAGCGGAAGTAGTGAATATTGGTGGCTGTTTGGGAATGGGTGAGCTGCTTCAATGA 324 0.4352 MMQVTLIHLEDRPHPGAFNVIQELQDEAEFRVIMLTGDHESSVKRVASAVGIKVFHCNLKPEDKLSHVKDTSRDMEQRNGIQWKRMRVLAAEVVNIGGCLGMGELLQ* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0581 107 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 3 77 - -
Vra7g0581 107 SUPERFAMILY HAD-like 4 76 IPR036412 -
Vra7g0581 107 Gene3D - 14 73 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0581 Vra-Chr7 9849912 9850859 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0581 3 74 Primary Pumps ATPases AT4G37270 63.889 1.73e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0581 K01534 - vra:111242117 217.624