Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0575 ATGTCTTTCAATATCATGCTCCAATCCTCGCCCTTCCTCGCCCTCCTTTTTCTTTTACTTCTTCTTCACACTTTCTCTATACCATCATGTCATTGCCAAACCACCACTTCTCCTCCTCAGAACATCGAAACTTTCTATCCAAATCAAACTTCGCCACCACAAACACCTGAGACATCACCACAGACACAACAACCACCAGCTCTTGACACACCACCTGCCCGTGCTTCTTCCCGTGGTAAGATAGCCAAGGCGGTGGCTACAACTGCAGCCAGCACCATCGTTTTTTGTGGTTTAATTTTCTTTCTGGTGCAGAGGTTCTTGAGGGCCAGAAAGAGAAAGAGAGAGGTGATAAGCAACACTGCTTCTGGTGGAGATAACCGTGTTGTGCCTCAGGGAAATGTGTTTGAGAGAATTGATGGAAATGTGAAGGGGTTGATTGTGGATGAGGATGGTTTGGATGTGGTTTATTGGAGAAAGCTTGAAGGGAAGAACTCTGACAAGGATCTATATAAGGAGGTTTTGAGTAGTCCCAGAAACAAAGAAAAAGAAGATGGTGATGATGAAAATCAGGCCAAGAAGTCCAACTCCGTCCAAGAAGTTCCTCTCCTTAGAGGGAAATCTTCAACTTCCCACTTGAATGTATATCCAGAAGATGATGAGCCATACAGATTTTCCCCACTTCCTTCTCCTCCTGCTTCTTATACTTCTGTTTCTGTTTCTGTTTCTGCTCCCTCTCCTTCTACTCTTCCTTCATCAGCTGGGGTTGTTATCAAGGGTGCTCAGAAACCAGACTCTCCAACTCAACCCTCTACTCCACCCCCTCCCGTTTCACCATCAACACCTTCATCCTCTACTTCTGTTTCAGCAGTTCCGAAAGCAAATAATCCTGCGCCGGCACCTCCCCCTCCCCCAATCCCAGCCCGAAGGAGTCCGGCACCACCTCCTCCTCCAGCCTCATCAAAAGCACCACCTGCTCCCATTCAAATTCCAGCTATTAAGCAAGGAAACTCTTCAGGAAAAGGCATCCCAGAAACCAGCAATGACCAAGTGAAGCTGAAGCCTCTGCATTGGGATAAGGTCAATACTAATAATGCTGATCACTCCATGGTTTGGGACAAAGTTGATCGTGGCTCTTTCAGGGTTGATCAAGATCTCATGGAAGCTCTCTTCGGTTATGTCGCCACCAACCGGAGATCTCCCAAAGGAAAAAGTCACTCAGCCATTCCAAGCAACGATGCCTCAGCTTCATCTGCAAAAGTTTTCCTTCTTGACCCGAGAAAATCACAGAACATTGCTATTGTTCTCAAATCTCTTGCAGTCTCACTAGGTGAAATTGTTGATGCACTCACTGATGGTATGGGCCTCAAACCAGATACTCTTGAAAAGCTTGCTAGAGTTTCCCTAACAGAAGAAGAGCAATCTCTCATCCTTGAATACAAAGGAGACCCGGCAAGACTTGCAGCAGCTGAATCTTTCCTCTATAATCTCCTCAAAGCTGTTCCCTCATCTTTTAAGCGCTTGAATGCCATGCTATTCAGGTTGAACTATGACTCGGAGATTCAAGAAACCAAGGAATCTCTGCAGATCATTGAACTGGGTTGTAAGGAGCTTAAAAGCAAAGGACTCTTTGTGAAGCTTCTTGAAGCAGTGCTCAAGGCAGGAAACAGAATGAATGCAGGAACTGCAAGGGGCAATGCACAAGCTTTCAATTTGGCTTCTCTAAGGAAACTCTCTGATGTTAAGAGCACCGATGGAAAAACCACATTACTTCACTTTGTGGTTGAAGAGGTAGTCCGTTCTGAGGGAAAAAGGGTTGCTCTTAACCGCAATGGCAGCCTGAGAAGTAGCAGCAGTAGGAGCAGCAGCAGTAGCAATGGAAACTATGACAACAATGTCGCTTCAAATGAACTGATAGAAAGAGAATATACGACACTAGGATTGCCAATTGTGGGAGGGATCAGTTCTGAGTTATCCAATGTTAAGAAAGCAGCACAAATAGATTATAACAATTTAGTTAATTCAATCTCGGCCCTCTCAACCCGGTTAGTCAAAGTTCAAGAACTGGTTTCCTTGTGTGGAAATAACGAAGAAGGACATTTTGTAAAGCAAATGGATCATTTTCTTAGAAATGCTGAGGAAGAGCTGAAATTATTAAGGGAGAAACAAGCAAGTGTATTGCAGCTTATCAAGAAAACAACACAGTACTATCAAGGAGGAGCTTCAAAAGAAACTACAGAAGACAATCTTCAATTGTTTGTCATAGTGAAGGATTTTCTGGGAATGGTTGATCAAGTATGCATTGAGATTGCACGTGATATGCAGAAGAGAAGATTTCCTCCTAAGGTCATTTTTGGGTAG 2358 0.4419 MSFNIMLQSSPFLALLFLLLLLHTFSIPSCHCQTTTSPPQNIETFYPNQTSPPQTPETSPQTQQPPALDTPPARASSRGKIAKAVATTAASTIVFCGLIFFLVQRFLRARKRKREVISNTASGGDNRVVPQGNVFERIDGNVKGLIVDEDGLDVVYWRKLEGKNSDKDLYKEVLSSPRNKEKEDGDDENQAKKSNSVQEVPLLRGKSSTSHLNVYPEDDEPYRFSPLPSPPASYTSVSVSVSAPSPSTLPSSAGVVIKGAQKPDSPTQPSTPPPPVSPSTPSSSTSVSAVPKANNPAPAPPPPPIPARRSPAPPPPPASSKAPPAPIQIPAIKQGNSSGKGIPETSNDQVKLKPLHWDKVNTNNADHSMVWDKVDRGSFRVDQDLMEALFGYVATNRRSPKGKSHSAIPSNDASASSAKVFLLDPRKSQNIAIVLKSLAVSLGEIVDALTDGMGLKPDTLEKLARVSLTEEEQSLILEYKGDPARLAAAESFLYNLLKAVPSSFKRLNAMLFRLNYDSEIQETKESLQIIELGCKELKSKGLFVKLLEAVLKAGNRMNAGTARGNAQAFNLASLRKLSDVKSTDGKTTLLHFVVEEVVRSEGKRVALNRNGSLRSSSSRSSSSSNGNYDNNVASNELIEREYTTLGLPIVGGISSELSNVKKAAQIDYNNLVNSISALSTRLVKVQELVSLCGNNEEGHFVKQMDHFLRNAEEELKLLREKQASVLQLIKKTTQYYQGGASKETTEDNLQLFVIVKDFLGMVDQVCIEIARDMQKRRFPPKVIFG* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0575 785 MobiDBLite consensus disorder prediction 171 351 - -
Vra7g0575 785 MobiDBLite consensus disorder prediction 38 70 - -
Vra7g0575 785 MobiDBLite consensus disorder prediction 266 280 - -
Vra7g0575 785 SMART it6_source 342 777 IPR015425 -
Vra7g0575 785 PANTHER FORMIN-RELATED 1 781 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vra7g0575 785 MobiDBLite consensus disorder prediction 608 629 - -
Vra7g0575 785 ProSiteProfiles Formin homology-2 (FH2) domain profile. 342 785 IPR015425 -
Vra7g0575 785 MobiDBLite consensus disorder prediction 331 345 - -
Vra7g0575 785 PANTHER FORMIN-LIKE PROTEIN 1 781 - -
Vra7g0575 785 SUPERFAMILY Formin homology 2 domain (FH2 domain) 355 777 - -
Vra7g0575 785 MobiDBLite consensus disorder prediction 229 254 - -
Vra7g0575 785 MobiDBLite consensus disorder prediction 294 324 - -
Vra7g0575 785 Gene3D Formin, FH2 domain 362 778 IPR042201 -
Vra7g0575 785 MobiDBLite consensus disorder prediction 38 76 - -
Vra7g0575 785 MobiDBLite consensus disorder prediction 194 214 - -
Vra7g0575 785 Coils Coil 701 728 - -
Vra7g0575 785 MobiDBLite consensus disorder prediction 171 193 - -
Vra7g0575 785 Pfam Formin Homology 2 Domain 346 762 IPR015425 -
Vra7g0575 785 MobiDBLite consensus disorder prediction 609 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0575 Vra-Chr7 9663861 9667296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0575 318 777 FH2 protein (formin) Gene Family AT1G70140 56.587 9.36e-168 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0575 - - gmx:100783219 1025.39