Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0568 ATGTCTTCTCGCAGATCAAACGGAAGAGCTAGTGGTAGAGATGCATTAGAAAATGAAGTCCCCTTGCCGCCGCTGCCTGATCGTACAACAAATTTGCAATGGGGTGAGGTTAAACCACTTTCAGGAAAACCATACTTTCATAGTATTCTTGCAAGTTCAAATCTCTATCCCCGTTATTATATGTGGCCTGCGACCAGCGTACGGTTAGAACTTCCTTTTTGTGAGGTCCCCACGATTCTCACCTATATGGGCAAGAGCTGGGACATGGTGTATTGTGGACAAAACAAACTGCAAGTTTTTAGACCCGCAGGATGGAAAAAGTTTGCTGTTGAGAATTGTTTGAGGGTTGGAGATGCATGCATTTTTGAGCTGATGGAAAGCAGTGACAAGAAAGTCATCTTTGAAGTTCAAATTCTTAGAGGTGACATCCCATCTGAAATTCTTAAAAATGAAATGATCATGGGTCAGAATCGGGAAATGCCAATTGTCCTTAACTAG 498 0.4237 MSSRRSNGRASGRDALENEVPLPPLPDRTTNLQWGEVKPLSGKPYFHSILASSNLYPRYYMWPATSVRLELPFCEVPTILTYMGKSWDMVYCGQNKLQVFRPAGWKKFAVENCLRVGDACIFELMESSDKKVIFEVQILRGDIPSEILKNEMIMGQNREMPIVLN* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0568 165 MobiDBLite consensus disorder prediction 1 24 - -
Vra7g0568 165 CDD B3_DNA 44 140 IPR003340 GO:0003677
Vra7g0568 165 Pfam B3 DNA binding domain 79 134 IPR003340 GO:0003677
Vra7g0568 165 SUPERFAMILY DNA-binding pseudobarrel domain 42 140 IPR015300 -
Vra7g0568 165 SMART B3_2 45 142 IPR003340 GO:0003677
Vra7g0568 165 Gene3D - 35 142 IPR015300 -
Vra7g0568 165 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 31 150 IPR044837 -
Vra7g0568 165 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS04G0386900 31 150 - -
Vra7g0568 165 ProSiteProfiles B3 DNA-binding domain profile. 84 142 IPR003340 GO:0003677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Vra7g0568 B3 4.2e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0568 - - gmx:100804948 227.254