Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0556 ATGGGTTCAGGGAGCTCGGAAGTTAGGGTTTTGGGGAAGTGGGCGAGCCCATTTTCCAACAGGGTTGAGCTTGCTCTGAAGCTGAAGGGAGTAACATACGAATACTCCGAGGAAGATCTCGCCAACAAGAGCGATGACCTACTCAGGTACAACCCTGTTCACAAGAAGGTTCCTATTCTTGTCCACAATGGAAATCCTTTAGCTGAGTCGCTTATTATTGTTGAATACATCGATGAGACTTGGAATAATAACCCCCTTTTGCCTCAACACCCTTACGAGAGAGCCTTGGCACGTTTCTGGGCTAAGACCTTAGATGACAAGATTTTGCCTGCATTATGGAATGCGTGCTGGAGTGATGAGAAGGGGCGAGAGAAGGCAACGGAGGAAGCCATTGAAGCTTTGGAGATCCTGCAGGAAGCACTGAAGGAGAAGAGGTTCTTTGGAGGAGAGAGCATAGGATTGGTAGATGTTGCAGCTAATTTCATTGGATATTGGGTTGAAATATTGCAAGAAATTGCAGGGTTGAAATTGCTTACCCTTGAAAAATTTCCAAAGTTATATAAATGGAGCCAAGAGTTTGTGAATCACCCTGTCATCAAAGAGGGTCTGCCTCCCAGAGATCAATTGTTTGCTTTCTTCAAAGCTTCTGCAAAGAAATAG 660 0.45 MGSGSSEVRVLGKWASPFSNRVELALKLKGVTYEYSEEDLANKSDDLLRYNPVHKKVPILVHNGNPLAESLIIVEYIDETWNNNPLLPQHPYERALARFWAKTLDDKILPALWNACWSDEKGREKATEEAIEALEILQEALKEKRFFGGESIGLVDVAANFIGYWVEILQEIAGLKLLTLEKFPKLYKWSQEFVNHPVIKEGLPPRDQLFAFFKASAKK* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0556 219 Coils Coil 123 144 - -
Vra7g0556 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Vra7g0556 219 CDD GST_N_Tau 8 81 - -
Vra7g0556 219 Pfam Glutathione S-transferase, C-terminal domain 107 197 IPR004046 -
Vra7g0556 219 CDD GST_C_Tau 91 215 IPR045074 GO:0004364|GO:0006749
Vra7g0556 219 SUPERFAMILY GST C-terminal domain-like 79 217 IPR036282 -
Vra7g0556 219 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Vra7g0556 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 216 IPR045073 -
Vra7g0556 219 Pfam Glutathione S-transferase, N-terminal domain 8 79 IPR004045 -
Vra7g0556 219 Gene3D - 87 219 - -
Vra7g0556 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 213 IPR010987 -
Vra7g0556 219 Gene3D Glutaredoxin 1 86 - -
Vra7g0556 219 SFLD Glutathione Transferase (cytosolic) 5 218 IPR040079 -
Vra7g0556 219 SFLD Main.3: Omega- and Tau-like 5 218 IPR045073 -
Vra7g0556 219 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0556 Vra-Chr7 9344815 9345851 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0556 8 215 Glutathione S-transferase Gene Family AT3G09270 57.143 1.26e-87 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0556 K00799 - gmx:100527381 380.948