Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0554 ATGGCAACTACTTCAGTGAGTCTTTTCAAGATTATCTTTGTTTTCTTCATTCTCTTCACTCTTCTCACACCTCAAGCCGTGGCTGATTGTGAAGCTGAATCAGCAAACACATGCAACAACAAAGAGAAAGCGTTGTCACTAAAACTCATAGCCATATTCACCATCTTAGTCTCCAGCATAATCGGTGTGACACTGCCCTTAGTCACACGTTCAGTTCCAGCTTTGAGCCCTGAAAACGATCTCTTCATAATTGTGAAGTGCTTCGCGGCTGGTATAATTCTTGGGACGGGCTTCATGCACGTGCTTCCCGATTCCTTTGACATGTTGTGGTCTGATTGCTTGAAGGAGAAACCGTGGCACGAGTTTCCATTTTCGGGGCTCGTGGCTATGTTTTCTGCTATAATAACGATGATGGTGGATTCTTTGGCTACTAGTGTTTACACCAAGAGGTGTAAGACTGAGATTATTCCCGCTGAGAGCAGCCCTGCAGGTGGTGGAGACCAAGAGATGGGTGGTGTTGTTAACTTTGGCCACTTCCATGGCCACCACCATAACCACCCTGAGAACAAGGCAGAAGGCCAAGAATCACAGCTTCTACGTTATCGTGTTGTTGCCATGGTATTAGAACTTGGAATTGTGGTTCATTCAGTGGTTATAGGACTTGGCATGGGAGCCTCAAACAACACATGCACCATAAAAGGTTTAATAGCTGCGCTTTGCTTCCATCAAATGTTTGAAGGCATGGGTCTCGGAGGGTGCATTCTGCAGGCCCAATACAAGTTCTTAAAGAAGGCCATCATGGTGTTTTTCTTCTCCGTAACAACTCCATTTGGAATTGCCCTAGGAATTGCATTGTCGACGACCTACAGAGAGAACAGTCCAAGTGCACTCATCACTGTGGGGTTGCTGAATGCTTCTTCTGCTGGTCTTTTGATCTACATGGCTTTGGTTGACCTTCTTTCTGCTGATTTCATGAGCCCTAGATTGCAGGGTAGCGTCAACCTTCAATTAAAATCTTACTTAGCAGTGTTTTTGGGTGCTGGTGGCATGTCTCTCATGGCAAAATGGGCTTAG 1074 0.4562 MATTSVSLFKIIFVFFILFTLLTPQAVADCEAESANTCNNKEKALSLKLIAIFTILVSSIIGVTLPLVTRSVPALSPENDLFIIVKCFAAGIILGTGFMHVLPDSFDMLWSDCLKEKPWHEFPFSGLVAMFSAIITMMVDSLATSVYTKRCKTEIIPAESSPAGGGDQEMGGVVNFGHFHGHHHNHPENKAEGQESQLLRYRVVAMVLELGIVVHSVVIGLGMGASNNTCTIKGLIAALCFHQMFEGMGLGGCILQAQYKFLKKAIMVFFFSVTTPFGIALGIALSTTYRENSPSALITVGLLNASSAGLLIYMALVDLLSADFMSPRLQGSVNLQLKSYLAVFLGAGGMSLMAKWA* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0554 357 PANTHER ZINC TRANSPORTER 10-RELATED 20 357 - -
Vra7g0554 357 Pfam ZIP Zinc transporter 46 354 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vra7g0554 357 PANTHER ZINC/IRON TRANSPORTER 20 357 - -
Vra7g0554 357 TIGRFAM zip: ZIP zinc/iron transport family 30 357 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0554 Vra-Chr7 9329968 9333602 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0554 25 357 Inorganic Solute Cotransporters AT1G31260 64.688 1.87e-158 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0554 K14709 - gmx:100795511 589.341