Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0544 ATGGAAGGGAATGCGAAAAACGAGCAAATCGTGGATGTAGGATCGGTTGTGGAAGCCGTTTCAGCTGATGACGGTGACGCTCCTCTCTACAGCCTCGAAAGTCTTTGCATGCGATGTGGTGAAAACGGGATTACAAGATTTTTATTGACTTTAATTCCTCACTTCAGAAAGATTTTGTTATCAGCTTTTGAATGTCCACACTGTGGTGAGAGGAACAATGAAGTACAGTTTGCTGGTGAAATTCAACCACGTGGTTGTCGCTACACTTTGGCAATCCCATCAGGCGAACAGAAGATGCTAAATCGTCAAGTGGTTAAATCAGAATCTGCTACCATTAAGATACCTGAACTGGATTTTGAGATTCCACCAGAGGCTCAGCGTGGTAGTCTGTCAACGGTGGAAGGGATACTTATGAGAGCAGGTGATGAACTTCAGGCCCTTCAAGAGGAACGCAAAAAAGTGACTCCAGAGACAGCTGATGCAATTGATCAGTTCTTGGTGAAACTGCGAGCCTGTGCAACAGGAGAATCAGCCATCACCTTTATTCTTGATGATCCTGCTGGAAATAGCTTCATCGAAAACCCGTTTGCACCATCGTCTGATCCATCATTGACGATCAAGTTTTATGAGAGAACTCCTGAGCAGCAAGCATCATTGGGATACCTTGTTGATTCCACACAGATTGAAGGAACTCGTGTTGATGTCCTGGAAGGGGGAGAAGCTGTGCCTACTGATCAGGTAAGGACAGAACCACATGGATCAATAGGGGCTACAGCTGGGCATCGAGCCATTGCTCAGAGTAACAGTGCAGAAATGGCTGAAGCCTTGTTTCGATATACGGCACCAGAAGAGGTGATGACTTTCCCATCTACTTGTGGTGCCTGTGCTGCCAAGTGTGAGACTCGAATGTTTGTCACCAATATTCCTTACTTTCAAGAAGTAATTGTTATGGCATCCACATGTGATATCTGTGGCTACCGCAACTCTGAGTTGAAACCTGGTGGACGAATTCCTGAAAAGGGGAAAAAAATTACTCTTTCTGTGAAGAATGTCAATGACCTTAGCCGTGATGTAATAAAGTCTGATACTGCAAGTGTAAAAGTTCCGGAACTTGACTTGGAGCTGGCAAGCGGAACCCTTGGAGGAATAGTTACAACTGTTGAAGGTTTAATCACAAGAATTGGTGAAAGCCTTGAGAGGGTCCATGGCTTTACTTTTGGAGATAGTCTTGATGAAAATAGTAGAAGCAAGTGGATAGACTTTAAAACAAGACTAAACAAGCTTCTTAGCTTGGAAGAAGCTTGGACTCTAATTCTTGATGACGCATTAGCCAATTCTTTTATAGCACCTGCAACTGATGATATGAAAGAGGACAAACAATTAGCATTTGAGGAATACGAGAGGTCATGGGAACAAAATGAAGAATTAGGTCTGAATGATATGGACACCTCTTCTGCCGAAGTTGGTTCTGCACCAACCAATACTTCTAAAATTGAGTGA 1500 0.4353 MEGNAKNEQIVDVGSVVEAVSADDGDAPLYSLESLCMRCGENGITRFLLTLIPHFRKILLSAFECPHCGERNNEVQFAGEIQPRGCRYTLAIPSGEQKMLNRQVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILMRAGDELQALQEERKKVTPETADAIDQFLVKLRACATGESAITFILDDPAGNSFIENPFAPSSDPSLTIKFYERTPEQQASLGYLVDSTQIEGTRVDVLEGGEAVPTDQVRTEPHGSIGATAGHRAIAQSNSAEMAEALFRYTAPEEVMTFPSTCGACAAKCETRMFVTNIPYFQEVIVMASTCDICGYRNSELKPGGRIPEKGKKITLSVKNVNDLSRDVIKSDTASVKVPELDLELASGTLGGIVTTVEGLITRIGESLERVHGFTFGDSLDENSRSKWIDFKTRLNKLLSLEEAWTLILDDALANSFIAPATDDMKEDKQLAFEEYERSWEQNEELGLNDMDTSSAEVGSAPTNTSKIE* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0544 499 MobiDBLite consensus disorder prediction 472 499 - -
Vra7g0544 499 Gene3D ZPR1, A/B domain 80 221 IPR042451 -
Vra7g0544 499 Gene3D ZPR1, A/B domain 336 478 IPR042451 -
Vra7g0544 499 SMART zpr1 290 450 IPR004457 GO:0008270
Vra7g0544 499 SMART zpr1 34 194 IPR004457 GO:0008270
Vra7g0544 499 PANTHER ZINC FINGER PROTEIN ZPR1 1 488 IPR040141 -
Vra7g0544 499 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 36 218 IPR004457 GO:0008270
Vra7g0544 499 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 291 482 IPR004457 GO:0008270
Vra7g0544 499 Pfam ZPR1 zinc-finger domain 34 193 IPR004457 GO:0008270
Vra7g0544 499 Pfam ZPR1 zinc-finger domain 290 448 IPR004457 GO:0008270
Vra7g0544 499 Coils Coil 130 150 - -
Vra7g0544 499 MobiDBLite consensus disorder prediction 476 499 - -
Vra7g0544 499 Gene3D ZPR1, zinc finger domain 26 79 IPR042452 -
Vra7g0544 499 Gene3D ZPR1, zinc finger domain 280 335 IPR042452 -
Vra7g0544 499 PANTHER ZINC FINGER PROTEIN ZPR1-RELATED 1 488 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0544 6 498 C2H2 Transcription Factor Family AT5G22480 74.899 0.0 765
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0544 K06874 - gmx:100798741 877.085