Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0541 ATGGCGAGGTTGAGGGTGTTGTCTGAGCTTGACACAGCCAGGACACAATACTATCACTTCAAAGCCATCATCATTGCAGGGATGGGGCTCTTCACCGATGCCTATGACCTTTTCTCAATCACTCTCATCATCAAGATGATGGGAAGGATATATTACGACCACCGCAAGGGACAAAACCAGTTTCAAACCCCTCCGCTCGTCACCTCCGCCCTCGTTGCTGCTGCTCTTCTGGGCACCGCCGTCGGTCAGCTCCTGTTCGGAAGGCTCGGCGATCTCAAGGGGCGCCGCCGAGTGTACGGATTCGCCTTGCTGTTGATGGTCTTCAGCTCCTTGGCCTCTGCCTTCTCCATTTGCATAAGAAAAACATGCGTTTTCGTCACTCTTGGCTTCTTCAGGTTTATGTTGGGGCTGGGGATTGGTGGGGACTACCCTCTGTCTTCAACGATAATGTCGGAGTTTGCGAACAAGAGGACACGAGGGTCGTTCATAGCGGCGGTGTTTTCGATGCAAGGGTTCGGCATATTGGCGAGCTCCACCGTGACGGTGGTGGTGTGCTCCATTTTTCGTGCGGCGTCGAAGTCGTCGGAGGCTGACGTCGCATGGAGGTTGATACTGATGCTGGGTTCCGTTCCGGCAGCCATGACTTACTACTGGCGCATGATGATGCCCGAAACTGCCAGTGAGATGCAATGGATGATCAGGTACACAGCGTTAGTGGAACACAATGTGATGCAAGCAGCAAAGGACATGGAGAAAGTTCTTGATGTAAGACTGAGCATGATAGCAGAGGAATACCCTTTGCCACCAATCCCACATCCCTACCCTCTATTTTCCAGGGAGTTCTTCCGCCGCCATGGTCGTGACCTCTTTGCATGTTCTTCAACATGGTTCCTGGTGGACATTGTCTTCTACAGCCAAGTTTTATTCCAAAGTGAAATATACAAACGCTACCTCGATGAAAACGGAAAAGTAGACGTCTATAAGGAGGCTATCCATGTGGCTTGGATCCAAGCAGTTATCACAGTGTGTTCCACCATCCCCGGTTACTTCTTCTCTGTCTACTTCATTGATAGATGGGGCAGGGTCAAAATTCAAATGATGGGTTTTTTCTTCATGGCAGTCATCTTTTTCATCATTGGAGTTCCCTATTACACTTATTGGACTACTCCCGACCATGAAGAGAACAAATGGTTCATGGTTTTGTATGGCCTTGCTTTTTTCTTTGCCAACTTTGGCCCCAACACTACCACTTTCATAGTCCCCGCTGAGCTTTTCCCAGCCAGGTTTAGGTCAACTTGTCATGGCATTTCTGGGGCAGCTGGGAAGGTTGGAGCGATGATTGGCTCTGTGGGCTTTCTTTGGGCTTCTCATAAGAAAAAGGAGTATGGGTACAGTAAGGGAATTGGGATGCAGGTTACCCTTATCATACTTGGAGGAGTGTGCTTATTGGGAATGGTGATCACCTACTTTTTCACCAGGGAAACCATGGGAAGGTCCTTGGAAGAGAATGAGGTTGATAGTGAGACCAATGAAGTAGAGCAACATAATAATCTTTGA 1557 0.49 MARLRVLSELDTARTQYYHFKAIIIAGMGLFTDAYDLFSITLIIKMMGRIYYDHRKGQNQFQTPPLVTSALVAAALLGTAVGQLLFGRLGDLKGRRRVYGFALLLMVFSSLASAFSICIRKTCVFVTLGFFRFMLGLGIGGDYPLSSTIMSEFANKRTRGSFIAAVFSMQGFGILASSTVTVVVCSIFRAASKSSEADVAWRLILMLGSVPAAMTYYWRMMMPETASEMQWMIRYTALVEHNVMQAAKDMEKVLDVRLSMIAEEYPLPPIPHPYPLFSREFFRRHGRDLFACSSTWFLVDIVFYSQVLFQSEIYKRYLDENGKVDVYKEAIHVAWIQAVITVCSTIPGYFFSVYFIDRWGRVKIQMMGFFFMAVIFFIIGVPYYTYWTTPDHEENKWFMVLYGLAFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAAGKVGAMIGSVGFLWASHKKKEYGYSKGIGMQVTLIILGGVCLLGMVITYFFTRETMGRSLEENEVDSETNEVEQHNNL* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0541 518 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-9-RELATED 2 507 - -
Vra7g0541 518 Gene3D MFS general substrate transporter like domains 18 518 IPR036259 -
Vra7g0541 518 ProSiteProfiles Major facilitator superfamily (MFS) profile. 22 496 IPR020846 GO:0022857
Vra7g0541 518 Coils Coil 498 518 - -
Vra7g0541 518 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 2 507 - -
Vra7g0541 518 Pfam Sugar (and other) transporter 24 504 IPR005828 GO:0016021|GO:0022857|GO:0055085
Vra7g0541 518 ProSitePatterns Sugar transport proteins signature 2. 134 159 IPR005829 GO:0016021|GO:0022857|GO:0055085
Vra7g0541 518 CDD MFS_PhT 23 495 - -
Vra7g0541 518 SUPERFAMILY MFS general substrate transporter 9 504 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0541 Vra-Chr7 9119731 9123287 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0541 1 504 Inorganic Solute Cotransporters AT1G76430 60.646 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0541 K08176 - gmx:100797683 871.692