Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0513 ATGAAGGACTTGGGCTTACATGATGACTTTGGTGCTCCCTTCTTCAAGGCCTTCTCCGGAATCTCGTTGATCCCAATGTTCTCGATCTTCACCACCAACCAGGTGGTTCTCGATCACGTTGCGTGCTCCTTCATGCATGTTATCGACTTCGACATCGGCCTTGAGATCCAATACGCTTCTCTCATGAAGGAGATAGCGGAGAAGGCCATGAAATTGCCGCTTCTCCGAATCACCATCGTCATTCCCGAAGAGTACGCCGTCGAGAGCACGCTGGTACGCGAAAACCTCGAGCAGTTCGCTCTCGAACTCAGGATTCACGTCCAAGTCAACTTCGTGCCGCTCCGAACCTTTGAGACACTCTCCTTTAAGGTAGTGAAGCTCGTGGACGGCGAGAGTACCACCGTGCTCCTTTCCCTAGTGATTTTCCACCACCTCGGAAATGCTGCCACGTTCTTGGCAGACTTGCAGATGGTCTCTCCAAGCGTTGTGGTTTTGGTGGATAGTAAGGGGTGGGCGGATATGGCTACAATAGCAGCCTCGTCGTTCCAACGCGGCGTCGCGAGCAATTTGGAGTACTACTTGATGATGTTGAGTCGCTGGATGTGTCGACGCCTGGGGAGGATCGAGATGATGCATCTGCGACCGAAGGTTGGGTTGAAGATGGAAGATGGAAGGAAAAGACGAGGGAAAGAGAGGGAGAAAAGTTGA 708 0.5226 MKDLGLHDDFGAPFFKAFSGISLIPMFSIFTTNQVVLDHVACSFMHVIDFDIGLEIQYASLMKEIAEKAMKLPLLRITIVIPEEYAVESTLVRENLEQFALELRIHVQVNFVPLRTFETLSFKVVKLVDGESTTVLLSLVIFHHLGNAATFLADLQMVSPSVVVLVDSKGWADMATIAASSFQRGVASNLEYYLMMLSRWMCRRLGRIEMMHLRPKVGLKMEDGRKRRGKEREKS* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0513 235 Pfam GRAS domain family 15 198 IPR005202 -
Vra7g0513 235 ProSiteProfiles GRAS family profile. 1 235 IPR005202 -
Vra7g0513 235 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 222 IPR005202 -
Vra7g0513 235 PANTHER SCARECROW-LIKE PROTEIN 15 15 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0513 Vra-Chr7 8660507 8661214 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0513 16 228 GRAS Transcription Factor Family AT4G36710 45.333 1.19e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vra7g0513 GRAS 1.5e-30 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0513 - - vra:106766027 436.802