Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0502 ATGTCGGATTCTTATGCTAGTACCTTTCACTCTCCCACTCCAAACGTCACCCATGCTACCTCCAAACTCACCACATTATGCTCAATAGCTCAACCTTATTGTATTTGCACTCACTGTAACCACATCCTCTCCTTCAACCACCATGTTGGTAATGCAACAGAGGAAGGGACAAATAACACAGGGTCCCATGTTCAGTCCCAGCAAAGCACGAGGTGGAGTCCAACGCCAGTTCAGTTACTGGTCCTTGAGGAATTGTATAGGCAAGGCACTAAAACACCATCAGCTGAACAGATTCAGCAAATAGCTTCACAGTTGCGCCAGTTTGGGAAGATTGAAGGGAAGAACGTGTTCTACTGGTTCCAGAATCACAAGGCGAGAGAGAGACAGAAGAGGCGCCGCAGGGAGATGGAGGAAAATAATGCCGCTTCTTCTAGCGAAGGGTTGAAAGAGACAGGTTGTGGAGTTAAAGAGACAAAGAAGTGGGCATCCACTTCAAACTGCAGTCGACATGCAGAGGAATCTGCCGCACTGGATATAGCAGAAAAGGGCTCTAATGGGTGGACTCAGTTTGAGGAGAGAGGCATACAAGTTTTGAGGAGAAACATATCAGAAAGAAGGTTGCAATTGCAAGATAACATGGAAATTCCTTGTTTCCCTCCCACTACTATGGCAGCTGCTCTCGCAACCTCACACAGAACACTTACCACACAACTTTTAATCCCTCAAAGTTATAACAGAGAAACTTTAAACTACTATGATGGAGAAAATGCAGATCCTCGAACCCTCGACCTATTTCCACATAAGAACGATGACCAAGATGGCATATGTCTTGCTGAGAGGAAATCCATGTTCTGTGCCAGTGCTTCTATGGACACTGATATCACCTCCAGCCAGTTTTTTGAGTTTCTTCCTTTAAGAAACTGA 924 0.4524 MSDSYASTFHSPTPNVTHATSKLTTLCSIAQPYCICTHCNHILSFNHHVGNATEEGTNNTGSHVQSQQSTRWSPTPVQLLVLEELYRQGTKTPSAEQIQQIASQLRQFGKIEGKNVFYWFQNHKARERQKRRRREMEENNAASSSEGLKETGCGVKETKKWASTSNCSRHAEESAALDIAEKGSNGWTQFEERGIQVLRRNISERRLQLQDNMEIPCFPPTTMAAALATSHRTLTTQLLIPQSYNRETLNYYDGENADPRTLDLFPHKNDDQDGICLAERKSMFCASASMDTDITSSQFFEFLPLRN* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0502 307 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 16 307 IPR044555 GO:0003700|GO:0099402
Vra7g0502 307 SMART HOX_1 67 134 IPR001356 GO:0003677
Vra7g0502 307 MobiDBLite consensus disorder prediction 127 150 - -
Vra7g0502 307 Coils Coil 126 146 - -
Vra7g0502 307 Pfam Homeodomain 69 129 IPR001356 GO:0003677
Vra7g0502 307 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 16 307 - -
Vra7g0502 307 ProSiteProfiles 'Homeobox' domain profile. 65 130 IPR001356 GO:0003677
Vra7g0502 307 SUPERFAMILY Homeodomain-like 63 133 IPR009057 -
Vra7g0502 307 Gene3D - 53 144 - -
Vra7g0502 307 CDD homeodomain 70 125 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0502 Vra-Chr7 8400069 8402154 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0502 58 307 Wox Gene Family AT3G18010 33.443 1.24e-36 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Vra7g0502 Homeodomain 3.7e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0502 - - gmx:102666678 467.618