Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0499 ATGGCAAAGCGTTTGATTCCCACCTTCAATCGCATTCTCGTAGAGAAAATTGTTCCCCCTTCCAAGACCAGCGCTGGCATTCTTCTCCCTGAGAAGTCCTCCCAGCTTAATTCCGGTAAGGTGATAGCGGTTGGTCCCGGATCACGAGACAAGGCAGGGAACTTCATCCCGGTGTCCGTCAAGGAAGGTGATCGTGTTCTCTTGCCTGAGTATGGTGGCACGCAAATCAAGCTCGACGACAAAGAGTTCCATTTGTTTAGGGACGAGGACATATTGGGCATTCTGCATGAATGA 294 0.5034 MAKRLIPTFNRILVEKIVPPSKTSAGILLPEKSSQLNSGKVIAVGPGSRDKAGNFIPVSVKEGDRVLLPEYGGTQIKLDDKEFHLFRDEDILGILHE* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0499 97 PANTHER GROES-LIKE FAMILY PROTEIN 1 97 - -
Vra7g0499 97 CDD cpn10 4 95 IPR020818 GO:0005524|GO:0006457|GO:0140662
Vra7g0499 97 Pfam Chaperonin 10 Kd subunit 5 94 IPR020818 GO:0005524|GO:0006457|GO:0140662
Vra7g0499 97 Gene3D GroES chaperonin 1 97 IPR037124 GO:0006457
Vra7g0499 97 SUPERFAMILY GroES-like 3 96 IPR011032 -
Vra7g0499 97 PRINTS 10kDa chaperonin signature 5 20 IPR020818 GO:0005524|GO:0006457|GO:0140662
Vra7g0499 97 PRINTS 10kDa chaperonin signature 26 47 IPR020818 GO:0005524|GO:0006457|GO:0140662
Vra7g0499 97 PRINTS 10kDa chaperonin signature 61 73 IPR020818 GO:0005524|GO:0006457|GO:0140662
Vra7g0499 97 PRINTS 10kDa chaperonin signature 82 95 IPR020818 GO:0005524|GO:0006457|GO:0140662
Vra7g0499 97 SMART Cpn10_2 4 95 IPR020818 GO:0005524|GO:0006457|GO:0140662
Vra7g0499 97 PANTHER 10 KDA HEAT SHOCK PROTEIN 1 97 IPR020818 GO:0005524|GO:0006457|GO:0140662
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0499 3 96 Calmodulin-binding Proteins AT5G20720 36.458 1.92e-11 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0499 K04078 - gmx:100527505 184.496