Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0496 ATGGAACGTAACAATAGCAGCACGCAGACGGATTTCGTGGAAGTAACATTAGAGGAAGGAACCTCGGGTTTCATCAAAGTACACAAAGTTGTTCCACCACCCTACAAGAGCAGCTTTCAGAAGTTCTTCGCCAAGGTCAAGGAAATCCTTTTCCCTGATGATCCTTTTCGCCAATTTAAGGGAGAACCTCTTCAGAGAAAACTAATCCTTGGAGCTCAATATTTATTCCCTGTGCTTCAATGGGCTCCTACTTACAACCTCAAACTCTTCAAATCTGACCTTATTTCTGGCCTCACAATTGCAAGTCTGGCCATCCCTCAGGGAATCAGCTATGCTAAGCTTGCAAATGTTCCTCCAATTCTGGGACTGTATTCTAGTTTTGTTCCTCCCCTTGTGTATGTTGTTCTTGGAAGCTCAATGGATCTTGCAGTAGGACCCGTTTCAATTGCTTCCCTAGTGCTAGGATCCATGATCAGTGAGGAAGTTTCTCCCACTGCACAACCTGACCTCTTTCTTCAAGTAGCCTTGACTTCAACGTTCTTTGCTGGGATCTTTCAATCAGCCCTTGGAATTCTAAGGCTTGGATTTATCATTGATTTTCTATCCAAAGCAATCCTTATTGGATTCATGGGTGGATCAGCTGTAATTGTAGGTCTGCAACAGCTGAAGGGTCTTCTCGGAATCACACATTTCACCAACAAGATGGCCCTGGTTCCTGTTATGAGTTCTGTGTTTAATAACATTGACGAGTGGTCGTGGCAAACAATAGTGATGGCCATTTGCTTCTTGGTGTTTCTGCTGGCTGCAAGACACGTGAGCATAAAGAAACCAGAGTTATTCTGGGTCTCAGCTGGTGCTCCTCTTGTGTCTGTCATAATTTCTACTGCCGTGTCTTTTGCAATAAAGGCTCAACGTCATGGCATCAGTGTGATTGGAAAATTGCCAAGAGGAGTAAATCCTCCTTCAGCAGATAAGCTACTCTTTCGAGGAGATCATCTGGCTCTGGCCATCAAAACTGGCCTTATTACTGGAATTTTATCCCTCACAGAAGGAATTGCAGTGGGAAGAACATTTGCTACCATGAGAAACTACAAAGTGGATGGAAATAAGGAAATGATGGCAATAGGATTCATGAATGTGGTTGGCTCCACAACATCCTGCTATGTTACAACAGGATCTTTCTCTCGCTCAGCTATCAATCACAACGCAGGTGCTAGAACAGCAATGTCCAACGTAGTAATGTCTGTGACAGTCTTAGTGACACTGTTGTTTCTGATGCCTTTGTTCCAATACACACCAAATGTTATATTGGGTGCAATCATAATATCAGCTGTAATTGGCCTCATTGATATTCATTCTGCTTGTCTCATTTGGAAGATAGACAAATTCGATTTCGTTGTGATGTTGGCAGCATTCTTTGGTGTCATTTTTATCTCTGTCCAAATGGGCCTAGTTATTTCAGTTGCATTATCAGTTTTAAGGATACTCCTGCAAATTACAAGGCCTAAAATAGTAATGTTGGGGAACATACCTGCGACAAACATATATAGAAATCTTCATCATTATAAGGAAGCCATAAGAGTACCTGGTTTTCTTATTTTAAGAATAAAGGCTCCCATCAACTTTGCAAACATCACATATCTCAACGAGAGAATATATCGGTGGGTAGAAGAAGAACAAGCTACGCTAAAAGAAAACATATGCCTTCAATTTCTCATTCTTGACATGTCAGCTGTGAGTACCATAGACACAAGTGGAGTCTCACTTTTCAAGGACTTGAAAAATGCATTGACAATGAAGGGTGTTTCGATTGTGTTGGTGAATCCTGTGGCTGAGGTCATAGATAAGCTGCAAAAATCAGATGATGCTAATGATTTCATTCGAGCAGAATACCTTTTCTTAACAGTTGGAGAGGCTGTAGCTTCACTTTCATCAACAATTAAGAGACAAACACCAACCGTACAAGACGCGAGGTGGGATATACCATTGTGA 1992 0.4167 MERNNSSTQTDFVEVTLEEGTSGFIKVHKVVPPPYKSSFQKFFAKVKEILFPDDPFRQFKGEPLQRKLILGAQYLFPVLQWAPTYNLKLFKSDLISGLTIASLAIPQGISYAKLANVPPILGLYSSFVPPLVYVVLGSSMDLAVGPVSIASLVLGSMISEEVSPTAQPDLFLQVALTSTFFAGIFQSALGILRLGFIIDFLSKAILIGFMGGSAVIVGLQQLKGLLGITHFTNKMALVPVMSSVFNNIDEWSWQTIVMAICFLVFLLAARHVSIKKPELFWVSAGAPLVSVIISTAVSFAIKAQRHGISVIGKLPRGVNPPSADKLLFRGDHLALAIKTGLITGILSLTEGIAVGRTFATMRNYKVDGNKEMMAIGFMNVVGSTTSCYVTTGSFSRSAINHNAGARTAMSNVVMSVTVLVTLLFLMPLFQYTPNVILGAIIISAVIGLIDIHSACLIWKIDKFDFVVMLAAFFGVIFISVQMGLVISVALSVLRILLQITRPKIVMLGNIPATNIYRNLHHYKEAIRVPGFLILRIKAPINFANITYLNERIYRWVEEEQATLKENICLQFLILDMSAVSTIDTSGVSLFKDLKNALTMKGVSIVLVNPVAEVIDKLQKSDDANDFIRAEYLFLTVGEAVASLSSTIKRQTPTVQDARWDIPL* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0496 663 TIGRFAM sulP: sulfate permease 77 639 IPR001902 GO:0015301|GO:0016020|GO:0055085
Vra7g0496 663 Pfam STAS domain 522 639 IPR002645 -
Vra7g0496 663 PANTHER SULFATE TRANSPORTER 25 649 IPR001902 GO:0015301|GO:0016020|GO:0055085
Vra7g0496 663 PANTHER SULFATE TRANSPORTER 3.3-RELATED 25 649 IPR030313 -
Vra7g0496 663 Pfam Sulfate permease family 90 470 IPR011547 GO:0016021
Vra7g0496 663 ProSiteProfiles STAS domain profile. 521 643 IPR002645 -
Vra7g0496 663 SUPERFAMILY SpoIIaa-like 527 643 IPR036513 -
Vra7g0496 663 Coils Coil 663 663 - -
Vra7g0496 663 CDD STAS_SulP_like_sulfate_transporter 522 636 - -
Vra7g0496 663 Gene3D STAS domain 501 646 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0496 Vra-Chr7 8265401 8271407 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0496 18 648 Inorganic Solute Cotransporters AT3G15990 63.465 0.0 821
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0496 K17471 - gmx:100779433 1021.92