Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0491 ATGGAGTCAGCCATCCACAAGTCCCACATCGTCAAAAACCATCTTCTCCTCTTCTTCTTCTGCTTATTTCTATGCCTGTCTGATTCACAATCAAGAAGCCATTCATTCCCCAAAGAAGCCCTCCCCAGCAGGCATGGTTACCTACCAATCAATCCTACTTCTGCTTCTGCAATTTTCTACGCTTTCTATGAAGCCCAAAACTCCACTTTGCCTGTCTCCCAAACCCCACTTCTCATTTGGCTCCAAGGTGGCCCTGGCTGCTCCTCCATGCTTGGCAACTTGTACGAACTTGGACCATGGCGAGTCACCCAATCCCTCACCCTTCAGCCCAACCCTGGTTCCTGGAACAGAATTTTTGGCCTTCTTTTTCTTGATAGTCCCATTGGATCTGGCTTCAGTGTGGCCTCAACCCCAGAAGAGATCCCAAGAGATCAAAACGCGGTTGCCAAACACCTNTTTGCTGCTATAACCAACTTTCTTCAACTGGATCCTCTTTTCAAGCATCGCCCTATTTATATTACTGGAGAAAGCTATGCTGGCAAGTATGTGCCTGCAATTGGGTACTATATATTGAAGAAAAATGAAAACTTGGATGCTTCCCAAAGAGTGAATCTGGCCGGTGTAGCTATTGGGGATGGGTTAACAGACCCCGAAACTCAAGTTCTCTCTCATGCTGTGAATGCTTACTATGCTGGATTGATCAACGAGAGGCAGAAGAATGAGTTGGAAAAAGGTCAACTGGAAGCTGTTGGGTTGATCCAAATGAGGAATTGGAGTGAAGCAACAGATGCGAGAAACAAGGTGTTGAGAAGGTTGCAGGACATGACAGGGTTGGCTACTTTGTATGACTATACAAGAAAGACTCCGTACGAGGATGATCTGGTTGAACGGTTCTTGAACATTCCGGAGGTGAAGAAGACACTGGGGGTGAAGGAATCGTTTGTGTATGAGATATGCAGTGATGTTGTTGGGAAGGCATTACACGGTGATGTGATGAAAAGTGTGAAACAGATGGTGGAATACTTGGTGAGGAAGAGCAGGGTGTTGCTTTATCAAGGTGAGTATGATTTGAGGGATGGAGTGGTCCAAACAGAGGTTTGGGTTAAGACAATGAAATGGGAAGGGATAGAAGAGTTTCTTAATGCTGAAAGGAAGATATGGAAGGTTAATGGAGAGCTTGCTGGCTATGTGCAGTCTTGGAAGTCTCTCACCAATGTTGTCGTTTTGGGAGCTGGCCATCTTCTTCCCACTGACCAACCTCTTCATTCTCAAGCTATGATTGAAGGTTGGGTTCTCCAAAAGCCTTTGTTTAAAAGCGTGTAA 1323 0.4558 MESAIHKSHIVKNHLLLFFFCLFLCLSDSQSRSHSFPKEALPSRHGYLPINPTSASAIFYAFYEAQNSTLPVSQTPLLIWLQGGPGCSSMLGNLYELGPWRVTQSLTLQPNPGSWNRIFGLLFLDSPIGSGFSVASTPEEIPRDQNAVAKHLFAAITNFLQLDPLFKHRPIYITGESYAGKYVPAIGYYILKKNENLDASQRVNLAGVAIGDGLTDPETQVLSHAVNAYYAGLINERQKNELEKGQLEAVGLIQMRNWSEATDARNKVLRRLQDMTGLATLYDYTRKTPYEDDLVERFLNIPEVKKTLGVKESFVYEICSDVVGKALHGDVMKSVKQMVEYLVRKSRVLLYQGEYDLRDGVVQTEVWVKTMKWEGIEEFLNAERKIWKVNGELAGYVQSWKSLTNVVVLGAGHLLPTDQPLHSQAMIEGWVLQKPLFKSV* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0491 440 Pfam Serine carboxypeptidase 42 431 IPR001563 GO:0004185|GO:0006508
Vra7g0491 440 ProSitePatterns Serine carboxypeptidases, serine active site. 173 180 IPR018202 GO:0004185
Vra7g0491 440 Gene3D alpha/beta hydrolase 26 438 IPR029058 -
Vra7g0491 440 SUPERFAMILY alpha/beta-Hydrolases 41 435 IPR029058 -
Vra7g0491 440 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 25 434 IPR001563 GO:0004185|GO:0006508
Vra7g0491 440 PANTHER CARBOXYPEPTIDASE 25 434 - -
Vra7g0491 440 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Vra7g0491 440 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Vra7g0491 440 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 184 IPR001563 GO:0004185|GO:0006508
Vra7g0491 440 PRINTS Carboxypeptidase C serine protease (S10) family signature 403 416 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0491 Vra-Chr7 8178657 8180398 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0491 330 436 Calmodulin-binding Proteins AT2G22960 24.074 1.66e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0491 K09645 - gmx:102663282 723.391