Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0489 ATGGCCTCATCGGTCTCCTTTACCCTTTTCTTCCTCTGCTTCTCTTTCTTTCACTTCCCGCTCTTTTCATCACAATCAAGCCATTCATTCCCCGAAGAAGCCCTCCCCAGCAGGTATGGTTACCTACCAATCAATCCTACTTCTGCTTCTGCAATTTTCTACGCTTTCTATGAAGCCCAAAACTCCACTTTGCCAGTCTCCCAAACCCCACTTCTCATTTGGCTCCAAGGTGGCCCTGGCTGCTCCTCCATGCTTGGCAACTTGTACGAACTTGGACCATGGCGAGTCACCCAATCCCTCACCCTTCAGCCCAACCCTGGTTCCTGGAACAGAATTTTTGGCCTTCTTTTTCTTGATAGTCCCATTGGATCTGGCTTCAGTGTGGCCTCAACCCCAGAAGAGATCCCAAGAGATCAAAACGCGGTTGCCAAACACCTTTTTNCTGCTATAACCAACTTTCTTCAACTGGATCCTCTTTTCAAGCATCGCCCTATTTATATTACTGGAGAAAGCTATGCTGGCAAGTATGTGCCTGCAATTGGGTACTATATATTGAAGAAAAATGAAAACTTGGATGCTTCCCAAAGAGTGAATCTGGCCGGTGTAGCTATTGGGGATGGGTTAACAGACCCCGAAACTCAAGTTCTCTCTCATGCTGTGAATGCTTACTATGCTGGATTGATCAACGAGAGGCAGAAGAATGAGTTGGAAAAAGGTCAACTGGAAGCTGTTGGGTTGATCCAAATGAGGAATTGGAGTGAAGCAACAGATGCGAGAAACAAGGTGTTGAGAAGGTTGCAGGACATGACAGGGTTGGCTACTTTGTATGACTATACAAGAAAGACTCCGTACGAGGATGATCTGGTTGAACGGTTCTTGAACATTCCGGAGGTGAAGAAGACACTGGGGGTGAAGGAATCGTTTGTGTATGAGATATGCAGTGATGTTGTTGGGAAGGCATTACATGGTGATGTGATGAAAAGTGTGAAACAGATGGTGGAATACTTGGTGAGGAAGAGCAGGGTGTTGCTTTATCAAGGTGAGTATGATTTGAGGGATGGAGTGGTCCAAACAGAGGTTTGGGTTAAGACAATGAAATGGGAAGGGATAGAAGAGTTTCTGAATGCTGAAAGGAAGATATGGAAGATTAATGGAGAGCTTGCTGGCTATGTGCAGTCTTGGAAGTCTCTCACCAATGTTGTCGTTTTGGGAGCTGGCCATCTTCTTCCCACTGACCAACCTCTTCATTCTCAAGCTATGATTGAAGATTGGGTTCTTCAAAGGGCTTTGTTTGAAAACTTTCCTAAGGCAAATGTATCAAGTAAGTCTGTACTTGTTGAATAA 1344 0.4509 MASSVSFTLFFLCFSFFHFPLFSSQSSHSFPEEALPSRYGYLPINPTSASAIFYAFYEAQNSTLPVSQTPLLIWLQGGPGCSSMLGNLYELGPWRVTQSLTLQPNPGSWNRIFGLLFLDSPIGSGFSVASTPEEIPRDQNAVAKHLFXAITNFLQLDPLFKHRPIYITGESYAGKYVPAIGYYILKKNENLDASQRVNLAGVAIGDGLTDPETQVLSHAVNAYYAGLINERQKNELEKGQLEAVGLIQMRNWSEATDARNKVLRRLQDMTGLATLYDYTRKTPYEDDLVERFLNIPEVKKTLGVKESFVYEICSDVVGKALHGDVMKSVKQMVEYLVRKSRVLLYQGEYDLRDGVVQTEVWVKTMKWEGIEEFLNAERKIWKINGELAGYVQSWKSLTNVVVLGAGHLLPTDQPLHSQAMIEDWVLQRALFENFPKANVSSKSVLVE* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0489 447 Pfam Serine carboxypeptidase 37 425 IPR001563 GO:0004185|GO:0006508
Vra7g0489 447 PANTHER CARBOXYPEPTIDASE 21 433 - -
Vra7g0489 447 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 21 433 IPR001563 GO:0004185|GO:0006508
Vra7g0489 447 Gene3D alpha/beta hydrolase 21 438 IPR029058 -
Vra7g0489 447 PRINTS Carboxypeptidase C serine protease (S10) family signature 105 117 IPR001563 GO:0004185|GO:0006508
Vra7g0489 447 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 128 IPR001563 GO:0004185|GO:0006508
Vra7g0489 447 PRINTS Carboxypeptidase C serine protease (S10) family signature 153 178 IPR001563 GO:0004185|GO:0006508
Vra7g0489 447 PRINTS Carboxypeptidase C serine protease (S10) family signature 397 410 IPR001563 GO:0004185|GO:0006508
Vra7g0489 447 SUPERFAMILY alpha/beta-Hydrolases 35 426 IPR029058 -
Vra7g0489 447 ProSitePatterns Serine carboxypeptidases, serine active site. 167 174 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0489 Vra-Chr7 8128406 8129983 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0489 324 430 Calmodulin-binding Proteins AT2G22960 24.074 1.57e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0489 K09645 - gmx:100780822 729.939