Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0488 ATGGTGATGAGTTCATTTTCTGCGAAATGGTCATCCCTATGGTTGAACGCCACCAACTTGCATCCAATTCTAACCCTTCTGCTCACTCTCATCACTTTGCTATGGTTGCTACGGTGGTTAAGGAATTCAACCAATGAACCATCTGCTTTGCCTCCAGGCCCTACAGGTCTTCCATTTCTTGGCTACCTTCCCTTTCTAGGAACCCATCCCCACCTCAAATTTCACAAGCTGGCACAACTTTATGGACCCATCTACAAGCTCACGTTGGGAACTAAAACAGTGGTGGTGGTTAGTTCACCCTCTCTGGTGAAAGAGATAGTGCGTGATCAAGACACCATATTTGCCAACCGGGAGCCTCTAATTGCTGCATTGGTTTCCTTGTACGGTGGCACTGACATAGCCTCTTTGCCTCACGGTCCACAGTGGAGGAAGGCTCGCAAGATATTGGTACGTGAGATGCTCAGCAGCACCAACCTCACTAACTCTTTTCCTCATAGGAGAGTGGAGGTTAAGAAATCCATCAGGGATGTGTACCAAAACAAAATAGGCTGCCCCATAAACGTCGGCGACTTGGCTTTTCTAACAGCTACAAATGCAATAATGAGTATGATTTGGGGCGAGACGTTGGAAGGAGAAGAAGGAGCTGCCATTGGGGTTGAGTTTAGAGCCGTTGTGTCAGAACTTATGGTGTTACTAGGGAAGCCAAATGTTTCAGATCTTTTCCCCGCTCTGGCCTTGTTAGATTTACAAGGAATTGAGAGAAGAACCAGAAAGGTCTCCCAATGGATTGATAAGCTCTTTGATTCTGCCATTGAAAAGCGAATGACTGTGACTGGGAAGGGAGAAAATAACTCAAACAAAGATTTCCTGCAGGTTCTCTTGGAGCTTACAAAGAGTGACAGTGAGACAACATCAATGACCATGAAGGAGATCAAAGCCATCCTCATAGATATAGTGGTGGGTGGAACCGATACAACATCAACAACATTGGAATGGGTGGTAGCGGAACTGATGCAGCATCCTGAGGCAATGGAGAGAGTTCATGAAGAGATGGATACTGTAATAGGATTGGAAAACGGTATTGAATTAGAATCCCAGTTGTTCAAATTAGAGTACTTAGAAGCTGTCATAAAGGAAACACTTCGTTTGCATCCTCCTCTTCCCTTTTTGGTACCTCGTTGCCCAAGTCAAACTAGCACTGTTGGTGGATATACCATTCCGAAAGGTGCACAGGTATTGTTGAACGTGTGGACTATACAGAGAAACCCTGACATTTGGGAAGATGCATTAGAATTTCGACCAGAGAGATTTCTGAGTGATGATGGCAAGTTGGATTACTGGGGCAACAAATTTGAGTATCTTCCTTTTGGATCTGGAAGAAGAATCTGTGCAGGGCTACCTCTTGCCGAAAAGATGATAATGTTTATGCTAGCTTCCTTCTTGCATTACTTTGAGTGGAGATTACCCAGTGGAAAAGTGCTTGAATTTTCAGGCAAATTTGGCATTGTAGTCAAGAAAATGAAGCCACTAATCGTTATTCCAAAGCCTAGACTATCTAAACCACAACTCTACATGTAA 1578 0.4417 MVMSSFSAKWSSLWLNATNLHPILTLLLTLITLLWLLRWLRNSTNEPSALPPGPTGLPFLGYLPFLGTHPHLKFHKLAQLYGPIYKLTLGTKTVVVVSSPSLVKEIVRDQDTIFANREPLIAALVSLYGGTDIASLPHGPQWRKARKILVREMLSSTNLTNSFPHRRVEVKKSIRDVYQNKIGCPINVGDLAFLTATNAIMSMIWGETLEGEEGAAIGVEFRAVVSELMVLLGKPNVSDLFPALALLDLQGIERRTRKVSQWIDKLFDSAIEKRMTVTGKGENNSNKDFLQVLLELTKSDSETTSMTMKEIKAILIDIVVGGTDTTSTTLEWVVAELMQHPEAMERVHEEMDTVIGLENGIELESQLFKLEYLEAVIKETLRLHPPLPFLVPRCPSQTSTVGGYTIPKGAQVLLNVWTIQRNPDIWEDALEFRPERFLSDDGKLDYWGNKFEYLPFGSGRRICAGLPLAEKMIMFMLASFLHYFEWRLPSGKVLEFSGKFGIVVKKMKPLIVIPKPRLSKPQLYM* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0488 525 Pfam Cytochrome P450 51 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0488 525 SUPERFAMILY Cytochrome P450 51 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0488 525 PRINTS E-class P450 group I signature 78 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0488 525 PRINTS E-class P450 group I signature 102 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0488 525 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0488 525 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0488 525 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0488 525 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0488 525 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0488 525 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0488 525 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0488 525 Gene3D Cytochrome P450 35 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0488 525 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0488 525 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0488 525 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0488 525 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0488 525 PANTHER OS08G0547900 PROTEIN 10 524 - -
Vra7g0488 525 PANTHER P450, PUTATIVE-RELATED 10 524 - -
Vra7g0488 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0488 Vra-Chr7 8110148 8113196 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0488 16 525 Cytochrome P450 AT4G12320 46.498 4.73e-168 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0488 - - gmx:100785686 818.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g0488 7 8110148 8113196 Vra7g1934 7 38860653 38862518 PCT