Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0463 ATGACCCAAAGTAAGGCCACCATGGGTATTCACGATCGCCAGCTTCACGTCTTTTTCTTCCCCTTCTTCGCAAATGGTCACATCATACCCACTATTGAGCTTGCTAGAGTCTTTGCCTCAAGAGGACTCAAAACCACCGTAGTCACCACTCCCCTCAACGAGCCATACATTTCAAGAACCGTAGGAAAAGCCAACATCACCATCAAAACCATCAAATTCCCGTCGCCGGAGCAAACTGGCTTGCCCGAAGGTTGCGAGAACTCCGACCGCCTATCTGGAATGCAGATCATCCCATTCTTGAAGTCCACTGTGCTTCTGCGGGACCCACTGGAGCAGCTGTTGCAGCAAGAACTCCCTGACCTCATAATCGCCGACATGTTCTTCCCATGGGCTACGGACTCAGCTGCCAAGTTCGGGATTCCTAGGATTGTGTTCCACGGATTGGGATTCTTCCCATTGTGCGTGTCCGCGTGCGTGAGAACATACAAGCCGCAGGACAAGGTTTCCTCGTACACCGAGCCCTTCCTGGTTCCGAATCTGCCGGGGGAAATAATGCTCACCAAGATGCAGCTTCCGCAGACCCCGAAACACGACGCGGAATTCACCAAGATTCTCGACGAAGCTAACGCGTCGGAGTTGAATAGCTACGGCGTGATTGCCAACAGCTTCTACGAACTCGAACCGGTTTACGCAGATCATTATAGGAATGAGCTTGGAAGAAAAGCGTGGCACTTGGGACCAGTTTGTTTGTCCAATAGGGACGCTGCTGAAAAAGCACACAGAGGAAAAGAAGCAACGATTGACCAGCACGAGTGTTTAAAGTGGCTTGATACGAAGGAACCTGATTCGGTTGTTTATGTTTGCTTTGGTAGCATGACAACCTTCCCCAATGCTCAACTGAAGGAAATTGCGTTAGGTTTGGAGGCTTCGGGGCAGGCTTTCATTTGGGTTGTGAAGAAAGAGTCGAGTGAGAATGAGGAATGGCTACCAGAAGGGTTTGAAGAAAGAACGGTAGATCAGGGAAAGGGTTTTATCATAAGGGGTTGGGCACCCCAAGTGTTGATTTTGGATCATAAAGCGGTTGGGGGATTTGTGACTCATTGTGGATGGAACTCAGCTATGGAAGGAATGTGTGCGGGGTTACCAATGGTGACATGGCCCATGTACGCTGAGCAATTTTACAATGCTAAGTTTTTGACGGACATAGTTAAGACTGGGGTCAGTGTTGGAGTGCAAACGTGGATTGGGTTGATGGGAGGTGAGCCTGTGAAGAAGGAGGTTATAGAGAAGGCTCTGAAGAGGATAATGGTGGGTGATGAAGCAGAGGAAATTAGAAACAGAGCCAAGGATATTGCTCAAATGGCAAAACGAGCTGTGGAGGAAGGAGGTTCATCTTACTCTGATTTCAACTCTTTAATTGAGGATTTGAGATCGCGAACGCTTTGA 1446 0.4889 MTQSKATMGIHDRQLHVFFFPFFANGHIIPTIELARVFASRGLKTTVVTTPLNEPYISRTVGKANITIKTIKFPSPEQTGLPEGCENSDRLSGMQIIPFLKSTVLLRDPLEQLLQQELPDLIIADMFFPWATDSAAKFGIPRIVFHGLGFFPLCVSACVRTYKPQDKVSSYTEPFLVPNLPGEIMLTKMQLPQTPKHDAEFTKILDEANASELNSYGVIANSFYELEPVYADHYRNELGRKAWHLGPVCLSNRDAAEKAHRGKEATIDQHECLKWLDTKEPDSVVYVCFGSMTTFPNAQLKEIALGLEASGQAFIWVVKKESSENEEWLPEGFEERTVDQGKGFIIRGWAPQVLILDHKAVGGFVTHCGWNSAMEGMCAGLPMVTWPMYAEQFYNAKFLTDIVKTGVSVGVQTWIGLMGGEPVKKEVIEKALKRIMVGDEAEEIRNRAKDIAQMAKRAVEEGGSSYSDFNSLIEDLRSRTL* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0463 481 Coils Coil 441 461 - -
Vra7g0463 481 CDD GT1_Gtf-like 15 455 IPR002213 GO:0008194
Vra7g0463 481 ProSitePatterns UDP-glycosyltransferases signature. 349 392 IPR035595 -
Vra7g0463 481 PANTHER GLYCOSYLTRANSFERASE 11 479 - -
Vra7g0463 481 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 13 476 - -
Vra7g0463 481 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 275 409 IPR002213 GO:0008194
Vra7g0463 481 Gene3D Glycogen Phosphorylase B; 270 460 - -
Vra7g0463 481 Gene3D Glycogen Phosphorylase B; 16 465 - -
Vra7g0463 481 PANTHER GLYCOSYLTRANSFERASE 11 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0463 Vra-Chr7 7570100 7571649 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0463 10 479 Glycosyltransferase AT2G15490 52.469 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0463 K23260 - gmx:100816053 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1053 11 9709062 9712526 Vra7g0463 7 7570100 7571649 PCT