Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0459 ATGATTTCAACACTCCGCACCTTAACATTTTTTCTTTGTCTTCTCTTAGTAGGTTGCCAAATCCTTGAAACCCCATCACCACTATCGGATTCAATCCCACTAATCCCTGACATTTTAAACTTCATAGACCAAAGACTCGCTCTGGTCTTCCCCATTATTCAAGCCTTCAAGAACACAATAACCTCAGATCCTTTGGGAATAACAGCAACATGGGTTGGTCCAGATATATGCAACTACACAGGCTTCTACTGTGACAACCCACCAGATAACCTCACTGCCACAACCATTGCTTCAATTGATTTCAATGGTTTCCAACTCACTGCTCCAACACTCGATGGCTTCATCGATCAACTCCCTGACCTCGCTCTTTTCCATGCAAACAGTAACAGATTTTCTGGCACCATATCGCCAAAAATAGCGGGACTCAAGTTTCTATACGAACTTGATTTAAGTAACAACTTGTTCTCCGGGTTATTCCCCACGTCGGTCATCAACATCCCCACCTTATCCTTTTTGGATATTAGGTACAACTTTTTCACCGGCACGGTTCCCCCACAGATTTTCATGCAGACATTAGATGTTCTTTTCCTCAACAACAACAATTTCATGCTCACACTGCCCAACAATCTAGGAGACACACCCGTCGTTTATCTGACGTTGGCCAACAACAAATTCACCGGGCCCATTCCCAGCAGCATTAGAAAAGCCTCGTCCACGTTGATCGAAGTGCTGCTTTTGAACAACCTTTTAACGGGTTGTCTTCCCTACGACATCGGGTTCTTGGGAAACGTGACGTTGTTTGATGTTGGTGCGAACCTCTTAACTGGGCCAATACCTTGGTCCTTTGGGTGCTTGAAGAAAGTGGAGCAGCTGAACCTGGCAAGGAACCTTTTGTATGGACAGGTTCCGGAAGTGGTGTGTGCGTTGGGGAATTTGGCGAATCTTTCATTGTCTTACAATTATTTTACGAAAGTGGGACCTTTATGCAAGAGGCTGATTCAAAGAGGGGTTCTGGATGTGAGGAAGAACTGTATTATTGGTCTTCCGGATCAGAGATCAGCGAAAGAGTGCATGGCGTTTTTTTCGATTCCGAGGTCTTGTCCGAACCCTGCATCGTTTAATATCATACCGTGTCAAATTCATTGGACGAAACCGCAAGAGAGAACTAAGAGGCATTTGCTTTCATATTCTGCTATTTCCAGGAATAGAGTGGTTTTGTAA 1221 0.4431 MISTLRTLTFFLCLLLVGCQILETPSPLSDSIPLIPDILNFIDQRLALVFPIIQAFKNTITSDPLGITATWVGPDICNYTGFYCDNPPDNLTATTIASIDFNGFQLTAPTLDGFIDQLPDLALFHANSNRFSGTISPKIAGLKFLYELDLSNNLFSGLFPTSVINIPTLSFLDIRYNFFTGTVPPQIFMQTLDVLFLNNNNFMLTLPNNLGDTPVVYLTLANNKFTGPIPSSIRKASSTLIEVLLLNNLLTGCLPYDIGFLGNVTLFDVGANLLTGPIPWSFGCLKKVEQLNLARNLLYGQVPEVVCALGNLANLSLSYNYFTKVGPLCKRLIQRGVLDVRKNCIIGLPDQRSAKECMAFFSIPRSCPNPASFNIIPCQIHWTKPQERTKRHLLSYSAISRNRVVL* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0459 406 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Vra7g0459 406 PANTHER SCOPOLETIN GLUCOSYLTRANSFERASE 7 402 - -
Vra7g0459 406 SUPERFAMILY L domain-like 56 347 - -
Vra7g0459 406 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 7 402 - -
Vra7g0459 406 Gene3D Ribonuclease Inhibitor 213 405 IPR032675 -
Vra7g0459 406 Gene3D Ribonuclease Inhibitor 52 211 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0459 Vra-Chr7 7468199 7469543 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0459 41 364 Leucine-rich Repeat extension Gene Families AT3G24480 48.765 3.88e-101 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0459 - - gmx:100813314 679.093