Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0458 ATGGGAAGAACAACCAAAACCATTTTCTCCTCTGTTTTACTCTGTTCACTCATACTTCAGCTTTACTTTTCAGAAGGAGTAGTAGCACAAGAGGTGGTGGCAAAATCAGAGAGCGAAGCATTAGGGGAAACAGAGAAAAGAGAAACACTAGAAATTATAATAGGTGGCGGAGGTTCCCCTGCTCCTTCCCCTGAAGCTCCATGTCCTCCTCCCCCACCCAAACTTAACCGTTTAGACAGAGCTCGTCGTGCGCTTCTCAATTTCAAAAACCTCATCGATGACCCAAACTGTTACACGCAAAATTGGGTAGACGGCACTGATACGTGTGACTTCAACGGGATACGATGCGCTACATATCCAACGGACAAACAGACAGCAGTTGCAGGAGTGGACTTAAACGGAGCAAGAGTGACGGGTAAAAACGGGTGCGCTTTGCCCCTCTCATCTCTCTTAGGCGAGAACCAAATACCGGAGCTCACATTCTTCCACGTCAACTCCAACGGCTTCGCCGGCTCTGTCCCCACCGATGTCACCAATTTCCCCTTCTTCTTCGAGCTCGACCTCAGTAACAACAAAGTCAAAGGCCAGTTTCCCCTCGACGCCATTAAGTCAAACCAACTAGTCTTCCTCGACCTCCGTTTCAATGAACTCACCGGCCCAATTCCCTTCCAACTTTTCCAGAAGGATCTCGACGTCATCTTCATCAACAACAACCACTTCACACAGTGCCTCCCCCAGAATTTCGGCTCCACGCCGGCCCGCTACCTCACTTTCGCCAACAACAACCTCACCGGCCCGATTCCCAAGAGCGTCGGTTACGCACCCAACCTCACCGAAGTTCTCTTCCTCGGGAACAAGTTCGACGGCTGCTTGCCCATTGAAATCGGAAACCTTAAAAAAGCTGTCGTCTTTGATGTGAGTAAGAATTTGCTCACCGGTCCAATCCCTCTCTCCTTCGGGTGCTTGAAGAGCATTCAGTATCTGAATTTGGCGCACAACAAATTCTACGGCTGTGTTCCCGACAACGTTTGTCAAATTCCTTCTCTCCGCAACAATGGGAATCTCTCCTTGGCCGACAATTACTTCAACGAGGTTGGCCCTTCCTGCTGGAGTTTGATCAAGTCCAAGGTTTTGGATGTCTCAAAGAATTGCATTCCTGGGCTCCCAAACCAAAGGTCACCCACCGAATGCTATTATTTTTACAAGACGAAGAAGACGTGTCCGAATCCGAGTTCTTTCTACACAGTGCCGTGTAAATCGCACTGGGGACACCCCAGTTCCGAAACCAATGTTCCAACCTCTGCGCCGGTGACTTACAAGACTCTAAAACCCCATCGTTTGAGATTATGA 1350 0.4919 MGRTTKTIFSSVLLCSLILQLYFSEGVVAQEVVAKSESEALGETEKRETLEIIIGGGGSPAPSPEAPCPPPPPKLNRLDRARRALLNFKNLIDDPNCYTQNWVDGTDTCDFNGIRCATYPTDKQTAVAGVDLNGARVTGKNGCALPLSSLLGENQIPELTFFHVNSNGFAGSVPTDVTNFPFFFELDLSNNKVKGQFPLDAIKSNQLVFLDLRFNELTGPIPFQLFQKDLDVIFINNNHFTQCLPQNFGSTPARYLTFANNNLTGPIPKSVGYAPNLTEVLFLGNKFDGCLPIEIGNLKKAVVFDVSKNLLTGPIPLSFGCLKSIQYLNLAHNKFYGCVPDNVCQIPSLRNNGNLSLADNYFNEVGPSCWSLIKSKVLDVSKNCIPGLPNQRSPTECYYFYKTKKTCPNPSSFYTVPCKSHWGHPSSETNVPTSAPVTYKTLKPHRLRL* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0458 449 Gene3D Ribonuclease Inhibitor 78 252 IPR032675 -
Vra7g0458 449 SUPERFAMILY L domain-like 81 385 - -
Vra7g0458 449 PANTHER BNAC05G26270D PROTEIN 12 438 - -
Vra7g0458 449 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 12 438 - -
Vra7g0458 449 Pfam Leucine rich repeat N-terminal domain 80 116 IPR013210 -
Vra7g0458 449 Gene3D Ribonuclease Inhibitor 253 405 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0458 Vra-Chr7 7461818 7463619 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0458 73 400 Leucine-rich Repeat extension Gene Families AT4G13340 42.515 1.07e-75 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0458 - - gmx:100796207 642.114