Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vra7g0453 | ATGGCAAACAACGGTGACCAAAATCAAACTGAAGCTGGAAGGCACCAAGAGGTTGGGCACAAGAGTCTTCTCCAGAGTGATGCTCTTTACCAGTATATTCTGGAGACCAGTGTCTACCCGAGAGAACCTGAATCCATGAAAGAATTGAGAGAGTTGACGGCAAAACACCCTTGGAATATCATGACTACCTCTGCTGACGAAGGACAATTCTTGAACATGCTCCTTAAGCTTATCAATGCCAAGAATACCATGGAAATTGGTGTCTACACTGGGTATTCACTGCTTGCCACCGCCCTCGCTCTTCCTGATGATGGAAAGATCTTGGCCATGGACATTAACAGGGAGAATTACGAGCTGGGTTTACCTGTAATTAAAAAAGCTGGTGTTGACCACAAAATTGAATTCAGAGAAGGTCCTGCTCTTCCAGTTCTCGATGAGATGGTTAAGGATGAGAAGAACCATGGGAGCTATGATTTCATATTTGTGGATGCGGACAAGGACAACTACCTCAACTACCACAAAAGGTTGATTGAGCTTGTCAAAGTTGGAGGCTTGATCGGGTACGACAACACCCTATGGAACGGTTCGGTGGTGGCACCCCCTGATGCTCCTCTCAGGAAGTATGTTAGGTACTACAGGGACTTCGTGTTGGAGCTCAACAAGGCCTTGGCTGTGGACCCCAGAATCGAAATTTGCATGCTTCCGGTTGGTGATGGAATCACCCTCTGCCGCCGGATCAAGTGA | 744 | 0.4718 | MANNGDQNQTEAGRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELRELTAKHPWNIMTTSADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIKKAGVDHKIEFREGPALPVLDEMVKDEKNHGSYDFIFVDADKDNYLNYHKRLIELVKVGGLIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAVDPRIEICMLPVGDGITLCRRIK* | 248 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vra7g0453 | 247 | PANTHER | O-METHYLTRANSFERASE-RELATED | 1 | 247 | - | - | |
| Vra7g0453 | 247 | Gene3D | Vaccinia Virus protein VP39 | 21 | 247 | IPR029063 | - | |
| Vra7g0453 | 247 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 26 | 245 | IPR029063 | - | |
| Vra7g0453 | 247 | CDD | AdoMet_MTases | 85 | 186 | - | - | |
| Vra7g0453 | 247 | Pfam | O-methyltransferase | 35 | 246 | IPR002935 | GO:0008171 | |
| Vra7g0453 | 247 | PANTHER | CAFFEOYL-COA O-METHYLTRANSFERASE 1 | 1 | 247 | - | - | |
| Vra7g0453 | 247 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 22 | 246 | IPR002935 | GO:0008171 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vra7g0453 | Vra-Chr7 | 7389123 | 7390883 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vra7g0453 | 3 | 246 | Monolignol Biosynthesis Gene Families | AT4G34050 | 88.934 | 1.07e-168 | 465 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vra7g0453 | K00588 | - | gmx:100811247 | 483.026 |