Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0440 ATGAACTTCAGGAACTACGATGATAATAACCCCACTTGGGATGCCATGCATGGGAAGACACCGGCGGCAAATGTTGGTTCTCTGCTGAGACAGCCATCATCAGTATACTCCCTTACATTTGATGAGTTTCAGAGCACCATGGGTGGTGTTGGGAAGGAATTTGGGTCCATGAACATGGATGAACTCTTGAAGAACATTTGGACAGCTGAAGAGACTCAGGCATTGACATTTTCAGCTGGTACAGGAGAAGGCCACAACCTTAACTCAATTAGTGGTGGTTTGCAAAGACAGGGTTCTTTGACATTGCCAAGGACTCTTAGTCAGAAAACAGTAGATGAAGTTTGGAGGGACTTGATCAAAGAAAGTGGTGGGGCCAATGATGGGAATGGCAATGGTAATGGTGGTTCATCCATTCCTCAAAGGCAACCAACATTGGGAGAAATGACTTTAGAGGAGTTTTTGGTGAGAGCTGGGGTGGTGAGAGAAGATGTGCCTCAACAACAACAACAAATTGGAAAACCAAATAACAATGGATGGTTTGGTAACTTTCCTAGACCAAACAATAACAATGGCCTACTTCTTGGTTTCCCACAACCAAATAGAAGTAATGGGAATATGGGTGAGAGGGTGGTGGAGACCAACAATAACTTAGCTCCCAAACAACCTCCTCCTCCTCCTCTATCACTAAACTCAAACCACTCTCACCGACCAACACAACAGCCACCACTTTTTCCAAAGCCTGCAAATTTAGCTTTTGCTGCTCCTATGCATTTGTTCAACAGTGCTCCACTTGCTAACCCTGGCAGAAGAGGAGGGTTGATCGAGCATTCATTGAATGCTGGACTTGTTGGTTTAGCCTCGGGTAATCCAGAGGCTTCTCCCTCAAGGAAAATATCATCAGATGTAATTACAAGAAGTAATNTAGACAACTCTTCACTGTCGCCAGTTCATTATTCAATCAACAGGGGAAGAAAATGCAGTGCTATAGAGAAAGTGGTTGAGAGAAGACAAAGGAGAATGATCAAAAATAGAGAATCAGCAGCCAGATCACGGGCTCGTAAGCAGGCCTACACTTTCGAACTAGAAGCTGAAGTTGCAAAACTTAAGGAAATAAACAGAGAATTGCAAAGAAAACAGGCAGAAATTAAGGAAATGCAGAAAAACAAGCAGGATTCGGACCCTGCATGCCACCCAAGGATATACGAAGGAGAAAGTCATTGTTGTGTGTATGTTTGTGAACTGTGA 1245 0.4361 MNFRNYDDNNPTWDAMHGKTPAANVGSLLRQPSSVYSLTFDEFQSTMGGVGKEFGSMNMDELLKNIWTAEETQALTFSAGTGEGHNLNSISGGLQRQGSLTLPRTLSQKTVDEVWRDLIKESGGANDGNGNGNGGSSIPQRQPTLGEMTLEEFLVRAGVVREDVPQQQQQIGKPNNNGWFGNFPRPNNNNGLLLGFPQPNRSNGNMGERVVETNNNLAPKQPPPPPLSLNSNHSHRPTQQPPLFPKPANLAFAAPMHLFNSAPLANPGRRGGLIEHSLNAGLVGLASGNPEASPSRKISSDVITRSNXDNSSLSPVHYSINRGRKCSAIEKVVERRQRRMIKNRESAARSRARKQAYTFELEAEVAKLKEINRELQRKQAEIKEMQKNKQDSDPACHPRIYEGESHCCVYVCEL* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0440 414 MobiDBLite consensus disorder prediction 169 247 - -
Vra7g0440 414 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 23 393 IPR043452 GO:0003700|GO:0045893
Vra7g0440 414 Gene3D - 333 391 - -
Vra7g0440 414 MobiDBLite consensus disorder prediction 126 144 - -
Vra7g0440 414 MobiDBLite consensus disorder prediction 119 145 - -
Vra7g0440 414 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 338 353 IPR004827 GO:0003700|GO:0006355
Vra7g0440 414 Coils Coil 358 388 - -
Vra7g0440 414 SMART brlzneu 331 390 IPR004827 GO:0003700|GO:0006355
Vra7g0440 414 CDD bZIP_plant_BZIP46 335 389 - -
Vra7g0440 414 Pfam bZIP transcription factor 335 389 IPR004827 GO:0003700|GO:0006355
Vra7g0440 414 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 333 384 IPR004827 GO:0003700|GO:0006355
Vra7g0440 414 PANTHER ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 7 23 393 - -
Vra7g0440 414 MobiDBLite consensus disorder prediction 169 217 - -
Vra7g0440 414 SUPERFAMILY Leucine zipper domain 335 383 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0440 Vra-Chr7 7218005 7220627 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0440 16 382 bZIP Transcription Factor Family AT1G49720 46.770 2.26e-88 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vra7g0440 bZIP_1 4.1e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0440 K14432 - gmx:100776600 550.051