Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0408 ATGGAGCTTCTGATCTCCTTCATTCTCCTCTTCACCTTTGTCTCCATACTCATTGCATTGTTCTTCACTCATAGTCTTTCAAATCCCCACAAGCCCCTCAAAAACCTGCCACCTGGACCATGGAAGCTGCCTCTTCTTGGCAACATTCACCAATTTGTTGGGCCACTTCCCCATCAAACTCTCAGAAACTTGGCTAACCAATTTGGACCCTTGATGCACCTCCAACTTGGTCAAACTTCACACATAATAGTCTCTTCACCAGATATTGCCAAAGAGGTTATGAAAACTCATGATGCCATCTTTGCCAACAGGCCTCATCTTATTGCTTCAAAATTCTTTCTTTATCATACCACCGACATAGTCTTTTCTCCCTACGGAAAAACTTGGAGACAACTTAAAAAGATTTGCATTTCTGAGTTGCTACATGCAAAGCATGTTCAATCACTGAGATGCATAAGAGAAGAAGAGGTAGCTAATCTAGTTAGAAAGCTGTGTGCCAATGAAGGATCGATCGTGAACCTCACCAAGGAAATTGAGTCGGTCATGAATGTAATAATTGTCAGAGCATCAAATGGCAAAAGGTGCAAAGACCAAGAAGCGTTCATATCAGCCATGGAGCAAACGTTGCAGTTGTTGGGAGGCTTCTCCATTGCTGATTTCTACCCTTCAATCAAAGTGCTTCCTTTTCTTACAGGAATCAAAACTAAACTTGAAAGAGCACAGAGAGAGAATGACAAGATCCTAGAAACTATGGTGAAGGATCACATGGAAAAAAATACCAACAGCCAGAAGGAGATGCAAGAGGATTTCATTGATGTTCTTCTCAAAACACAAAAAAGAAATGACTTGGAAATTCCCCTGACTCACAACAACATTAAAGCTGTCATCTGGGACATGTTTGTGGGTGGGACTGCAGCACCAGCAGCGGTTGTAGTATGGGCAATGTCAGAACTGATGAAAAATCCTGAGGTAATGGAGAAGGCACAGAGTGAGGTGAGAAAGGTGTTCAACGAGAAAGGTTATGTGGATGAAGAAGAAGTTGGAAAGTGTGAATACTTAAATTCAGTGATGAAAGAAACAATGAGGCTGCATCCACCAGAGGCATTGTTAGTTCCAAGAGAAAACAGTGAGGCTTGTGTGATCAAAGGGTATGAAATCCCTGCAAAGAGTAAGGTGATTATCAATGCTTGGGCCATTGGGAGAGACCCGATGTATTGGAATGAAGCAGAGAGATTTGTGGCTGAGAGATTTATTGAAAGTTGTTATGATTTCAGTGGCACAAACTTTGAATACATCCCTTTTGGGGCTGGAAGGAGAATTTGTCCAGGAGCTGCATTTTCTGTGCGTAACATGTTGCTGTTATTGGCCAATTTGCTTTACCATTTTGTTTGGAAGCTGCCATATGGAACCACACACCAAGAATTCGACATGTCCGAGTCCTTTGGCCTTACTGTTAGAAGAGCAAATGATCTTTGCTTAATTCCCATGTCTTATCACCCTTCCACCATTGCCAATCACTAA 1521 0.4201 MELLISFILLFTFVSILIALFFTHSLSNPHKPLKNLPPGPWKLPLLGNIHQFVGPLPHQTLRNLANQFGPLMHLQLGQTSHIIVSSPDIAKEVMKTHDAIFANRPHLIASKFFLYHTTDIVFSPYGKTWRQLKKICISELLHAKHVQSLRCIREEEVANLVRKLCANEGSIVNLTKEIESVMNVIIVRASNGKRCKDQEAFISAMEQTLQLLGGFSIADFYPSIKVLPFLTGIKTKLERAQRENDKILETMVKDHMEKNTNSQKEMQEDFIDVLLKTQKRNDLEIPLTHNNIKAVIWDMFVGGTAAPAAVVVWAMSELMKNPEVMEKAQSEVRKVFNEKGYVDEEEVGKCEYLNSVMKETMRLHPPEALLVPRENSEACVIKGYEIPAKSKVIINAWAIGRDPMYWNEAERFVAERFIESCYDFSGTNFEYIPFGAGRRICPGAAFSVRNMLLLLANLLYHFVWKLPYGTTHQEFDMSESFGLTVRRANDLCLIPMSYHPSTIANH* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0408 506 SUPERFAMILY Cytochrome P450 34 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0408 506 Coils Coil 230 250 - -
Vra7g0408 506 PANTHER CYTOCHROME P450 71B11-RELATED 10 498 - -
Vra7g0408 506 PANTHER CYTOCHROME P450 71D10 10 498 - -
Vra7g0408 506 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0408 506 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0408 506 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0408 506 Gene3D Cytochrome P450 30 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0408 506 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0408 506 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0408 506 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0408 506 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0408 506 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0408 506 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0408 506 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0408 506 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0408 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Vra7g0408 506 Pfam Cytochrome P450 37 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0408 Vra-Chr7 6467351 6471537 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0408 37 498 Cytochrome P450 AT3G26330 39.915 4.50e-122 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0408 - K23806 var:108339903 784.252