Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0407 ATGGAGAAGGAAAGGTGTGAGAATGTGATGCTGTTACAAAAAAGTGTGAAGAAGCTTCTCTTTGGAAGCTGGGAAGAGAAAGAAGTGGCAGCAAAAGAGATAGAAAGGTTGGCTAAAGAATATGAGAAGGTGAGGGAATTGGCGACTGAGCTTGGGGTGGTCAGAGTGTTGGTTTCCATGGCGCTTTCCGACGTCGCTAGCCGCCGCCGAGTAGCACTCAAGGCATTGATCCACCTATCCAATGGAAATCACAATTTTAGGAACAAGGCTTTGATAGTGGAGGCAGGACTGTTGTGCAAACTGCCTAAGAAAATTGACCTTGAAGATGAATCAATAAGAGAGTTTGCAGATTTGCTCGCTTCGTTATCATCTCTTGGAAATATCCAATTTCCTCATTCTTCATTAGACTTTCTCCAATTTCTCATAGACATTCTAAAGTCATGCCCAAGCTTTGATACAAAAGAGTCGTGTTTGGTAGCCATGTGCAACATTTCAACTGTGCTAGAGAATGCAGGGCCTTTGATTTCTAAAGGGGTTGTACCTATTCTGTTGGAACTGTGCTCAGAGAAAGGAACATCAGAGAAAGCACTTAGCATCCTTGGGAACTTGGGGGTGACTTTAATGGGAAAGAAAGCATTGGAGAACAGCTCAATGGTGCCAAAATGCTTGATTGAGATCTTATCGTGGGAAGATGAACCCAAATGCCAAGCGTTGTCAGCTAATATTCTGATTATTCTGGCTCATAAAAATTCAACACAGAGAAGTAAAATGGTACAGTCAGGGATTATTCCTGTACTTCTTCAAGTAGCTTTATTAGGAAGTTTTTCGGCTCAGAAAAGAGCACGGAAATTATTGCGATGGTTCAGGGATGAACGGCAAATAGAAGAAGGGAGGACAACGATGAAGAGTTTAGTGAGAGAAAGTCTGCATAGGAATATGGAAATAATAACTGAAAGAGTTAATCCAGGAGAGGATTCTTCTAACGGGCTTAAGTCCCCGGTTACCAGCACAAGCTCCAAAAGTTTGCCAAACTGA 1035 0.4232 MEKERCENVMLLQKSVKKLLFGSWEEKEVAAKEIERLAKEYEKVRELATELGVVRVLVSMALSDVASRRRVALKALIHLSNGNHNFRNKALIVEAGLLCKLPKKIDLEDESIREFADLLASLSSLGNIQFPHSSLDFLQFLIDILKSCPSFDTKESCLVAMCNISTVLENAGPLISKGVVPILLELCSEKGTSEKALSILGNLGVTLMGKKALENSSMVPKCLIEILSWEDEPKCQALSANILIILAHKNSTQRSKMVQSGIIPVLLQVALLGSFSAQKRARKLLRWFRDERQIEEGRTTMKSLVRESLHRNMEIITERVNPGEDSSNGLKSPVTSTSSKSLPN* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0407 344 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 3 343 - -
Vra7g0407 344 MobiDBLite consensus disorder prediction 317 344 - -
Vra7g0407 344 Gene3D - 210 286 IPR011989 -
Vra7g0407 344 Coils Coil 27 51 - -
Vra7g0407 344 Gene3D - 12 206 IPR011989 -
Vra7g0407 344 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 3 343 - -
Vra7g0407 344 SUPERFAMILY ARM repeat 17 270 IPR016024 -
Vra7g0407 344 MobiDBLite consensus disorder prediction 321 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0407 Vra-Chr7 6431173 6433625 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0407 12 298 U-box Gene Family AT2G23140 26.207 4.02e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0407 - - vra:106765996 660.988