Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0403 ATGTGTACACACTTCAACATTCTTCTTTTCTTTCTCACACTTTGTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCACACCCTCGCCGTGTTCTTCACCAACCCCTCTTCCCCAGAATCTCTATCCCTCCAACACATCCTCCAGCTTTATCCCCTCAACCCCAAAAGCAACACCATTTACCCAAGTTTCCATTTTCATCTTCTTCATCCTTCTCGCCTCCACCGCCGCAAAAACCTTTCTTTCCTTCTTACCATTCCCCTCCACTCCCACCTTCCCCCACCGTCGTTGCTACTTTCCCTGCTAACATCTCCTCCCTCCTCCTCCCCCACCCCTACTCCCACCACCACCGCTCCGCCGCCGCCCTAGCCGTCTCCCTCTCCCTCTTCTCCCTCGCCCTCCTCGTCGCAGCCGCGTTCTTTCTCCTCCACCGCCGCCGCGCTAACAGGACTTCCTCCTCCGACGCCACCCATGACGACGACGATGAGAAAGCCTCGAGATCCGACAGCCTCCGCCTGTTCCCGTCGAACGCCGCCGCCTCCGACGGCGTCGATAGAAAACCCCGCGGAAAGTCCTCCCCGACGTCGGAGCTACTCTACCTCGGCACGGTAGCGAACTCGGTGAACTCAACGCTAGACACAAGCTCCAGTCACCACGACGACGGTTTCCGGCCACCGTATCAAAAACTCGGCGACTCGCCGGAACTGAACCCACTCCCACCTTTGCCACGTCACAAATTCAAACCATGGATGAATGAAGATGACGGTGATAAAAATGTGAAAGAAAAAGTTGAAAAACAAGAAGAGGCAGATAAAGAAGAAGAAGATGAACAGTTTTTTTCTCCAAGAAGTTCTTCTGGTGGGAACAATCAACATAGTCCTCCTTCTCCTTCAGCCGTTGCTGCTTCAAGTTCGCGCGTGAATAATAAAATCGGTTCTACAAGCTTCACTTCTCGAACCCCTTCGTACCCTCGTTCCAATTCCCTCTCTTTCTCTCGTTCCCCGTCTCTTAATTTCAGCCCCGCAAGTGTTAAATCACTCCCTCCACAAAACCCTGCTTCTCCTTCTTTCTCTTCATCATCTTCTTCTCCCAGGGAAGAATGGCATGTTCCTTCAAGGGACCAAAATTCTCCCGCGAGAAATTTACCTCCTCCGCCGCCGCCGCCACTTCCGCCGCCTGGGATTTGGGAAGCTCCAGTTTCTGTTAGGAAAGTGAGTGAGGAGACACCGAAGCCAAAGTTGAAAGCTTTACATTGGGATAAAGTTAAGGCCAGCTCGGACAGGGTCATGGTTTGGGACCAGTTGAGACCCAGTTCTTTTCAGTTGAACGAGGATATGATTGAAACGCTTTTTATGGTAAATAATTCCAAGGAGGGTGTCGGGGTTGCGATTAGAGATAATGCTCGGCGCCACATAGTTCATTCTGCTTCTCCCATGCCCATGGAGAATAGGGTCCTTGACCCTAAGAAGTCTCAGAACATTGCCATTTTGCTTAGGGCTCTCAATGTTACCATTGATGAAGTTTGTGATGCCCTCAGAGAAGGCAATTGTGATACGTTGGGAACAGAACTTCTTGAAAGTTTGTTAAAGATGGCTCCAACAAAAGATGAAGAATCTAAGCTGAAGGAATTTCAAGATGAATCGCCCTTCAAGCTTGGCCCAGCTGAGAAATTTCTCAAAGTTGTTCTTGATATACCTTTCGCTTTTAAGAGAGTGGATGCTATGCTCTACATTGCTAATTTTGATTCAGAATTAGAATACCTTAAAAAGTCATTTGAAACTCTGGAGGTGGCCTGTGAGGAATTAAAGAATAGTCGAATGTTTTTGAAGATACTTGAAGCAGTATTAAGAACTGGAAATAGAATGAATGTTGGCACCAATCGTGGTGATGCTCATGCGTTCAAACTGGACACACTTTTAAAGTTAGCTGATATTAAAGGAACTGATGGAAAGACTTCTCTGTTGCATTTTGTTGTACAGGAAATTGTCAGAACCGAGGGTTCTCATGTTTCTGCTTCTAACCATCAGCATGCCTCTGAAAATGTCCAACAATACAGTCTTCAAGATGAGGTTGACTTTAAAAAGCTTGGCCTGCAAATTGTTTCGGGATTGAGCGGGGAGCTCACCAATGTTAAAAAAGCAGCTGCTATGGATTCAGACATGCTCAGTAGTGATGTTGCCAAACTTGCCAGAGGAATTGACAAAGTTGTGCAAGTAGTGAAATTGAATGAAGAGTCACCTTTGAAAGAAACTAACCAAAAGTTTTCGGAGGCGATGAAAGGTTTCTTGGAAAGGGGAGAGCAAGAGATTTCAACAATCCAGGCCCAAGAGAAAAATTGTTTCTCTTCGGTGAAGGAGATAACTGAGTATTTCCATGGAAATTCGGCAAAGGAAGAAGCTCATCCATTTAGAATTTTTATGGTTGTGAGGGATTTCCTTTCTATTCTAGATGCTGTTTGCAAGGAAGTTGGTAAAGTGAATGAGAGAACTTTGGTTGGTTCCCGTCATTCTGTAATGCCTGCAAATCCTATAATGCAATCCTTTTTTCCTGAGATTATTGGTAAGCAACCATCTGATTCCTCCGAATCTGACTAA 2592 0.4626 MCTHFNILLFFLTLCFSSSSSSSSSSHPRRVLHQPLFPRISIPPTHPPALSPQPQKQHHLPKFPFSSSSSFSPPPPQKPFFPSYHSPPLPPSPTVVATFPANISSLLLPHPYSHHHRSAAALAVSLSLFSLALLVAAAFFLLHRRRANRTSSSDATHDDDDEKASRSDSLRLFPSNAAASDGVDRKPRGKSSPTSELLYLGTVANSVNSTLDTSSSHHDDGFRPPYQKLGDSPELNPLPPLPRHKFKPWMNEDDGDKNVKEKVEKQEEADKEEEDEQFFSPRSSSGGNNQHSPPSPSAVAASSSRVNNKIGSTSFTSRTPSYPRSNSLSFSRSPSLNFSPASVKSLPPQNPASPSFSSSSSSPREEWHVPSRDQNSPARNLPPPPPPPLPPPGIWEAPVSVRKVSEETPKPKLKALHWDKVKASSDRVMVWDQLRPSSFQLNEDMIETLFMVNNSKEGVGVAIRDNARRHIVHSASPMPMENRVLDPKKSQNIAILLRALNVTIDEVCDALREGNCDTLGTELLESLLKMAPTKDEESKLKEFQDESPFKLGPAEKFLKVVLDIPFAFKRVDAMLYIANFDSELEYLKKSFETLEVACEELKNSRMFLKILEAVLRTGNRMNVGTNRGDAHAFKLDTLLKLADIKGTDGKTSLLHFVVQEIVRTEGSHVSASNHQHASENVQQYSLQDEVDFKKLGLQIVSGLSGELTNVKKAAAMDSDMLSSDVAKLARGIDKVVQVVKLNEESPLKETNQKFSEAMKGFLERGEQEISTIQAQEKNCFSSVKEITEYFHGNSAKEEAHPFRIFMVVRDFLSILDAVCKEVGKVNERTLVGSRHSVMPANPIMQSFFPEIIGKQPSDSSESD* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0403 863 MobiDBLite consensus disorder prediction 377 395 - -
Vra7g0403 863 Gene3D Formin, FH2 domain 409 837 IPR042201 -
Vra7g0403 863 Coils Coil 584 604 - -
Vra7g0403 863 MobiDBLite consensus disorder prediction 148 196 - -
Vra7g0403 863 SMART it6_source 403 830 IPR015425 -
Vra7g0403 863 MobiDBLite consensus disorder prediction 246 267 - -
Vra7g0403 863 MobiDBLite consensus disorder prediction 44 85 - -
Vra7g0403 863 Pfam Formin Homology 2 Domain 406 815 IPR015425 -
Vra7g0403 863 Coils Coil 256 276 - -
Vra7g0403 863 PANTHER FORMIN-LIKE PROTEIN 2 10 860 - -
Vra7g0403 863 MobiDBLite consensus disorder prediction 68 85 - -
Vra7g0403 863 MobiDBLite consensus disorder prediction 210 395 - -
Vra7g0403 863 MobiDBLite consensus disorder prediction 148 168 - -
Vra7g0403 863 PANTHER FORMIN-RELATED 10 860 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vra7g0403 863 SUPERFAMILY Formin homology 2 domain (FH2 domain) 382 828 - -
Vra7g0403 863 MobiDBLite consensus disorder prediction 280 365 - -
Vra7g0403 863 ProSiteProfiles Formin homology-2 (FH2) domain profile. 403 841 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0403 Vra-Chr7 6394192 6398849 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0403 18 863 FH2 protein (formin) Gene Family AT2G43800 45.829 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0403 - - gmx:100786203 1218.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g0403 7 6394192 6398849 Vra7g0403 7 6394192 6398849 ECH