Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0375 ATGGCGTCAAATAGCCAATCACCGCCTCTCGAGATATTAGTTCGAGGACCCGAACAATTTTCTCTCTGGACTGGACCACCCTTCGCCGACGGTCAACCCGCCGTCAAGCTCGAAAATGTTAACTGCATCAGTGCCAAGTTCAGCGACGATGGATCCAAGCTCATGATCACCAAATCCAACTCGTTGATTTCTGTGTACGACTGCAACACTGCTAAAGAGATTAGGGCTTTTCAAGTTCCCAATGTCGTTGCCGCTACGTTGTCACCCTGTGGTACTTACTTGCAAACCTTTCAGAAACCTTCGGCGCCGCAGGAGAAGAACGTCACGCTGTGGAAAATCGACACTGGTGCTGCTGTCTACCAACAGTCGCAAAAGAACATGACAAAAGGCAATTGGCCTGCGATTCAGTTTAGTTCTGATGAAGCTACTGCGTGTCGGTTGGCAACTAATGAGGTGCAGTTTTTTGACACTGGGGATTTTTCTAAAGGAGTTACCATTCGGTTAAGAGTTCCGGGGGTTGCTGCTGCTGAGCTTTCTAGTTTACCGGGATCCCATGTAGCTGCATTTGTTCCAGAATCCAAGGGGGTTCCTGCAAGTGTACAGATATATGCTAGCAGAAATGCGTCTCAAAGTCAACCTGTTGCTCGACGTAGTTTTTTCCGATGTTCAACCACCCAACTTAAATGGAATCATGGCTCAACTGGGCTTCTAGTGGTGGTGCAGTCAGATGTTGACAAAACTAATCAGAGTTACTATGGAGAATCAAAATTATGCTATTTGACAACAGATGGAATGCATGAAGGACTTGTGCCTCTCCGGAAAGATGGGCCTATTCATGATGCTCAGTGGTCATATTCTGGCTTGGAATTTGCTGTTGTGTATGGATTCATGCCTGCTAAAGCAACTTTGTTCGACAAGAAGTGCAATCCTCTTCTAGAGCTTGGAACTGGTCCTTACAACACTATTCGTTGGAACCCAAAAGGGAAATTTTTATGTTTGGCTGGCTTTGGTAACTTGCCCGGTGATATGGTATTCTGGGATTACATAGATAAAAAGCAACTTGGAACCACTAAGGCTGAATGGTCTGTGACTAGTGAATGGTCACCAGATGGGTGCTATTTCATGACAGCTACAACAGCTCCAAGGCTTCAAGTTGACAATGGGATCAAGATTTTTCACTACAATGGGTCATTGTACTTCAAGAAGATGTTTGACAAATTGTACCAGGTTGATTGGAAACCAGAGTCACCGAGTAAGTTTGGTGATATTGCCGAATTAATTAAGTCTCTAAATTTGGTCCAACTTGAAGATAAAAAACCAGCAGGTCAAGGACCACCAAAGTCAAACCAGACTTCCGTTAGAGCCTCTTCCGCCAATCCCCAAGCGCAAAAGCCTGCTGCGTATCGTCCACCACATGCTAAGAATGCAGCTGCTATTCAGGCACAGTTGTTGGGAGAGACTCCTTCAGAATCAATAAGCAAGAATGCATTACGAAACAAGAAAAAGAGGGAAAAACAGAAGGAGAAAAAGGCAGCTTCTGATGCCAGTTCTTCGTAA 1557 0.4502 MASNSQSPPLEILVRGPEQFSLWTGPPFADGQPAVKLENVNCISAKFSDDGSKLMITKSNSLISVYDCNTAKEIRAFQVPNVVAATLSPCGTYLQTFQKPSAPQEKNVTLWKIDTGAAVYQQSQKNMTKGNWPAIQFSSDEATACRLATNEVQFFDTGDFSKGVTIRLRVPGVAAAELSSLPGSHVAAFVPESKGVPASVQIYASRNASQSQPVARRSFFRCSTTQLKWNHGSTGLLVVVQSDVDKTNQSYYGESKLCYLTTDGMHEGLVPLRKDGPIHDAQWSYSGLEFAVVYGFMPAKATLFDKKCNPLLELGTGPYNTIRWNPKGKFLCLAGFGNLPGDMVFWDYIDKKQLGTTKAEWSVTSEWSPDGCYFMTATTAPRLQVDNGIKIFHYNGSLYFKKMFDKLYQVDWKPESPSKFGDIAELIKSLNLVQLEDKKPAGQGPPKSNQTSVRASSANPQAQKPAAYRPPHAKNAAAIQAQLLGETPSESISKNALRNKKKREKQKEKKAASDASSS* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0375 518 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2A 9 515 IPR011387 GO:0003743|GO:0006413
Vra7g0375 518 SUPERFAMILY DPP6 N-terminal domain-like 41 411 - -
Vra7g0375 518 Pfam Eukaryotic translation initiation factor eIF2A 217 410 IPR013979 -
Vra7g0375 518 PIRSF Transl_init_eIF2A 4 518 IPR011387 GO:0003743|GO:0006413
Vra7g0375 518 Coils Coil 494 514 - -
Vra7g0375 518 Gene3D - 196 420 IPR015943 GO:0005515
Vra7g0375 518 MobiDBLite consensus disorder prediction 437 518 - -
Vra7g0375 518 Gene3D - 29 185 IPR015943 GO:0005515
Vra7g0375 518 MobiDBLite consensus disorder prediction 444 463 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0375 68 418 Eukaryotic Initiation Factors Gene Family AT5G27640 23.545 7.17e-22 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0375 K15026 - gmx:100811589 953.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g0375 7 5893949 5903484 Vra7g0375 7 5893949 5903484 ECH