Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0363 ATGGCTGTTGGGCCAGGAATGGATATGCCCATCATGCATGACAGTGATCGCTACGAACTCCTGCGTGACATTGGTTCTGGCAACTTCGGTGTAGCCAGGCTCATGAGGGACAAGCACACCGAGGAACTTGTTGCTGTTAAGTATATTGAGAGAGGTGAAAAGATAGATGAAAATGTACAGAGAGAAATTATAAATCACAGATCTCTGAGGCATCCTAATATTGTGAGGTTCAAGGAGGTTATATTGACACCAACACATTTGGCAATTGTGATGGAATATGCTTCTGGAGGAGAGCTATTTGAGCGAATATGCAATGCAGGGCGATTCAGTGAGGATGAGGCACGCTTCTTCTTCCAACAACTTATATCAGGGGTTAGCTATTGTCATGCAATGCAAGTATGCCATCGAGACTTGAAGTTGGAAAACACATTGTTGGATGGTAGTCCAGCTCCTCGTTTGAAGATTTGTGATTTTGGCTATTCAAAGTCCTCAGTGCTACATTCTCAACCAAAATCTACAGTGGGAACCCCTGCATATATCGCTCCAGAAGTTTTGCTTAAGAAGGAATATGATGGCAAGATTGCAGATGTGTGGTCTTGTGGGGTGACTTTATATGTCATGTTGGTGGGTGCATATCCATTTGAGGATCCTGAGGAACCTAAAAATTTCCGCAAGACAATACATAGGATTTTGAATGTTCAGTACTCAATTCCAGACTATGTTCATATATCTCCCGAGTGCCGTCATCTGATATCAAGGATTTTTGTTGCTGATCCTGCAAAAAAAGTAAAATTGTTTGTACAACAGAGAATAAGTATTCCTGAAATTAGAAACCACGAGTGGTTTTTGAAGAACCTTCCAAGTGATCTGATGGATGGGAATAGCAACAACCAGTTTGAGGAGCCTGATCAACCAATGCAAAGCATTGAAGAAATCATGCAGATAATCAGAGAGGCTACAATTCCTGCAGCTGGATCTCAGTCTCCCAACCATGATCTTACTGGTAGCTTGGATATTGATGAGGAGGACATGGATACAGATCCTGATCTTGACTTAGATAGCAGTGGAGAAATAGTGTATGCTATGTAA 1089 0.4187 MAVGPGMDMPIMHDSDRYELLRDIGSGNFGVARLMRDKHTEELVAVKYIERGEKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYSIPDYVHISPECRHLISRIFVADPAKKVKLFVQQRISIPEIRNHEWFLKNLPSDLMDGNSNNQFEEPDQPMQSIEEIMQIIREATIPAAGSQSPNHDLTGSLDIDEEDMDTDPDLDLDSSGEIVYAM* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0363 362 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Vra7g0363 362 Pfam Protein kinase domain 18 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g0363 362 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2E 10 357 - -
Vra7g0363 362 Gene3D Phosphorylase Kinase; domain 1 1 93 - -
Vra7g0363 362 MobiDBLite consensus disorder prediction 321 355 - -
Vra7g0363 362 MobiDBLite consensus disorder prediction 338 352 - -
Vra7g0363 362 PANTHER SERINE/THREONINE KINASE 10 357 - -
Vra7g0363 362 ProSiteProfiles Protein kinase domain profile. 18 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g0363 362 SMART serkin_6 18 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g0363 362 CDD STKc_SnRK2-3 17 281 - -
Vra7g0363 362 Gene3D Transferase(Phosphotransferase) domain 1 94 290 - -
Vra7g0363 362 SUPERFAMILY Protein kinase-like (PK-like) 11 306 IPR011009 -
Vra7g0363 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0363 Vra-Chr7 5698694 5701318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0363 17 288 CBL-interacting serine-threonine protein kinases AT5G25110 44.170 2.78e-67 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Vra7g0363 Pkinase 3.6e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0363 K14498 - gmx:100796253 669.848