Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra7g0332 | ATGAGTGGTGGCAGGAAGAGGAAGCTGCGTTTAAGCAAGATCTACTCATTCGCGTGCTGCAAGGCATCTTTCAAGGGAGATGATTCACAGATTGGAGGAAAAAATTATTCCAGGGTGGTGTTCTGCAATGAGCCAGATATCTTTGAGGATGGTGTTAAGAATTTTGCAGATAACTCTGTCAGATCTACAAAATATACTCTTGCAACTTTCTTTCCCAAATCTTTGTTTGAACAGTTTAGGAGGGTGGCAAACTTCTATTTTTTGGTCACTGGCACCTTGGCCTTAACAAAACTTGCTCCATATACTGCTGCCAGTGCTATCTTTCCACTGATTGTTGTTATTGGAGCTACTATGGTGAAAGAAGGTATCGAAGACTGGCGCAGGAAAAAACAGGATATAGAGGTGAACAATAGAAGAGTTAAAGTTCATAAAGTTGGTGGTATTTTTGAATATACTGCATGGAAGAATCTGAGGGTGGGGAATATAGTGAAGGTAGAGAAGGATGAGTTCTTCCCGGCTGACCTGCTGTTGCTTTCATCCAGTTATGAGGATGCTGTTTGCTATGTTGAGACCATGAACTTAGATGGGGAGACAAATTTGAAGTTAAAACAAGGGTTAGAGGTAACATCTTCCTTACAGGAGGATCTTAACTTCCAAAAATTTAAAGCTACAGTGAAATGTGAAGACCCCAATGCAAATTTGTATTCATTTGTTGGGAGCATAGAGTTTGAAGAGAAGAATTATGCCCTCTCTCCTCAGCAACTTCTTCTCCGTGACTCTAAACTTCGTAATACAGATTACATTTTTGGAGCTGTCATTTTCACTGGTCATGACACTAAGGTTATTCAAAATTCTACTGACCCACCTTCAAAAAGAAGTAGAATTGAGAAGAAGATGGACGAAGTCATCTATTTCTTGTTTTGTATTTTGTTTTTAATGGCATTTGTTGGATCTATTTTCTTTTGCATTGCAACTAAAGATGACTTCCAAAATGGGTTGATGAAAAGATGGTATTTAAGACCAGACGATTCTGCTGTTTTCTTTGACCCAAAAAGACCAGCTGCTGCTGCTTTCTTTCATTGTTTGACAGCCTTAATGTTGTATGGGTTCTTTATTCCTATCTCTTTGTATGTGTCAATAGAAATGGTCAAAGTTCTTCAGAGTATTTTCATCAATCAAGATATCCATATGTACTACAAGGAAGCAGACAAACCAGCCCGAGCTCGTACTTCTAATTTGAATGAGGAGCTTGGGCAGGTTGATACAATACTTTCTGACAAGACTGGAACTCTGACCTGCAACTCAATGGAGTTCATCAAATGTTCTATTGCTGGGGTAGCATATGGCTGTGGTGCTACAGAGGTTGAGAAGGCCATGGGTAGAAGAAAAGGTTCACCACCAATTCATGAGCATGATATTGAATCAGAAGCACATAACATTAGGGGTTCGCTTGATAAAAAAGCACTTATTAAAGGCTTTAACTTTGATGATGAAAGAATAAGAGATGGACATTGGGTAAATGAGCCTCATGCAGATGTTATCCAAAAGTTTTTCCGCGTGTTGGCTGTATGTCATACAGCCATAACAGAAGTGAATGAAGAAACCGGAAATGTTTCATATGAGGCTGAATCCCCAGATGAAGCCGCATTTCTGATTGCAGCAAGAGAACTTGGTTTTGAATTCTACAGAAGGGGTCAGACTTGTTTATCGACATTTGAGTTGGATCCAGTTTCTGGCAATAAAGTTGAAAGGAAATACAAGCTTCTCAATGTTTTGGAATTCAATAGCTCAAGGAAGCGAATGTCAGTGATAGTGGAAGATGAAGAAGGGAAGATTTTGCTTCTCTGCAAAGGTGCAGACAGCATCATGTTTGAAAGACTTGCCAAGAATGGGAGGGAATTTGAAGAGAAAACCATGGCGCACGTGCATGAATATGCTGATGCAGGTCTGAGAACCCTTATTCTGGCCTATCGCGAGCTTGGTGCGGAAGAGTACAAGGAGTTTGATAATAAATTCTCCAAGGCCAAGAATTTAGTCAGTGCTGATCAGGAGAAACTGATTGAGGAAGTAGCAGATAAGATTGAGAAGAACCTGGTCCTTCTCGGTGCCACTGCCGTGGAGGACAAGCTCCAAGATGGGGTTCCTAATTGCATTGACAAGCTTGCCCAAGCTGGAATTAAAATTTGGGTTTTGACTGGGGATAAAATGGAGACTGCAATCAACATTGGTTTTGCTTGCAGTTTGCTTAGAGAAGGGATGAAGCAGATTATAATTCATTTGGAAAGTCCAGAAATTCAAGCACTAGAGAAAGATGGGGACAAGATGGCCATTGCCAAGGCATCAAGGCAAAGTGTCCTCTTTCAGATATCTGAAGGTGCTGCCCAACTCACTGCGTACAGAGGGAGCTCTCAGAAGGCATTTGCTCTGATTATTGATGGAAAATCACTTGTTTATGCACTAGAAGACAATATAAAGAACATGTTTCTGGAGCTAGCGATGCATTGTGCATCTGTTATTTGTTGTCGCTCATCCCCAAAGCAGAAGGCACTGGTTACTAGATTGGTTAAATCTGGAACTGGGAAAACAACCTTAGCTATTGGGGATGGAGCTAACGATGTGGGAATGCTTCAAGAAGCAGATATAGGGGTTGGTATAAGTGGTGTTGAAGGAATGCAGGCAGTTATGTCTAGTGATATTGCAATTGCACAATTCCGGTATTTGGAACGGTTACTCCTGGTTCACGGACACTGGTGTTACAGAAGGATCTCGTCTATGATATGCTACTTTTTCTACAAGAATATCACATTTGGTTTCACTCTGTTCTTGTATGAGGTGTATGCATCATTCTCTGGACAACCAGCTTACAATGACTGGTTTTTGTCTCTCTATAATGTCTTCTTTTCATCACTTCCTGTGGTTGCACTTGGGGTGTTTGACCAGGATGTCTCCGCTCGGTACTGCCTGAAGTTTCCTTTGTTATATCAAGAAGGAGTACAAAATGTTCTGTTCAGCTGGCGTAGAATACTCAGCTGGATGCTTAATGGATTTATCAGTGCCTTAATAATTTTCTTCTTCTGCACAAAAGCGATGGAGCTCCAGGCCTTCGATGCAGAGGGTAGAACTGCCGGAAAGGATATATTGGGAGTAACAATGTATACCTGTGTAGTTTGGGTTGTAAACTTGCAAATGGCACTAGCTATAAGCTACTTCACCTTGATCCAACATTTTTTCATCTGGGGTTCCATTCTTTTCTGGTATATTTTTCTCATGGTATATGGAGCAATGCCCTCACACTTTAGTACAAATGCTTACAAAGTCTTCATTGAAGCTCTTGCTCCATCCCCTTCCTATTGGCTTGTGACATTCTTTGTGGTTATCTCAACCCTTATACCATACTTCTCCTACGCAGCAATTCAGATGCGATTCTTTCCCATGTACCATGAACTAGTACAATGGATAAGGTATGAAGGGAAGATTAAGGATCCTGAGTTTTGTGATATGGTGCGGCAGAGATCATTGCGGCCAACAACCGTGGGTTCAACAGCACGCTTGGCTGCTAAGGCTCACCACGTAAGAGACAGAAATGTTAAACAGTAG | 3597 | 0.4117 | MSGGRKRKLRLSKIYSFACCKASFKGDDSQIGGKNYSRVVFCNEPDIFEDGVKNFADNSVRSTKYTLATFFPKSLFEQFRRVANFYFLVTGTLALTKLAPYTAASAIFPLIVVIGATMVKEGIEDWRRKKQDIEVNNRRVKVHKVGGIFEYTAWKNLRVGNIVKVEKDEFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLEVTSSLQEDLNFQKFKATVKCEDPNANLYSFVGSIEFEEKNYALSPQQLLLRDSKLRNTDYIFGAVIFTGHDTKVIQNSTDPPSKRSRIEKKMDEVIYFLFCILFLMAFVGSIFFCIATKDDFQNGLMKRWYLRPDDSAVFFDPKRPAAAAFFHCLTALMLYGFFIPISLYVSIEMVKVLQSIFINQDIHMYYKEADKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGCGATEVEKAMGRRKGSPPIHEHDIESEAHNIRGSLDKKALIKGFNFDDERIRDGHWVNEPHADVIQKFFRVLAVCHTAITEVNEETGNVSYEAESPDEAAFLIAARELGFEFYRRGQTCLSTFELDPVSGNKVERKYKLLNVLEFNSSRKRMSVIVEDEEGKILLLCKGADSIMFERLAKNGREFEEKTMAHVHEYADAGLRTLILAYRELGAEEYKEFDNKFSKAKNLVSADQEKLIEEVADKIEKNLVLLGATAVEDKLQDGVPNCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLREGMKQIIIHLESPEIQALEKDGDKMAIAKASRQSVLFQISEGAAQLTAYRGSSQKAFALIIDGKSLVYALEDNIKNMFLELAMHCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLYEVYASFSGQPAYNDWFLSLYNVFFSSLPVVALGVFDQDVSARYCLKFPLLYQEGVQNVLFSWRRILSWMLNGFISALIIFFFCTKAMELQAFDAEGRTAGKDILGVTMYTCVVWVVNLQMALAISYFTLIQHFFIWGSILFWYIFLMVYGAMPSHFSTNAYKVFIEALAPSPSYWLVTFFVVISTLIPYFSYAAIQMRFFPMYHELVQWIRYEGKIKDPEFCDMVRQRSLRPTTVGSTARLAAKAHHVRDRNVKQ* | 1199 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra7g0332 | 1198 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 838 | 948 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Vra7g0332 | 1198 | CDD | P-type_ATPase_APLT_Dnf-like | 57 | 1026 | - | - | |
Vra7g0332 | 1198 | Pfam | Cation transport ATPase (P-type) | 523 | 627 | - | - | |
Vra7g0332 | 1198 | Gene3D | - | 564 | 701 | IPR023299 | GO:0000166 | |
Vra7g0332 | 1198 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 1 | 1194 | - | - | |
Vra7g0332 | 1198 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 894 | 1144 | IPR032630 | - | |
Vra7g0332 | 1198 | PRINTS | P-type cation-transporting ATPase superfamily signature | 424 | 438 | - | - | |
Vra7g0332 | 1198 | PRINTS | P-type cation-transporting ATPase superfamily signature | 866 | 885 | - | - | |
Vra7g0332 | 1198 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 500 | 703 | IPR023299 | GO:0000166 | |
Vra7g0332 | 1198 | SFLD | C1.7: P-type atpase like | 408 | 917 | - | - | |
Vra7g0332 | 1198 | Gene3D | - | 702 | 906 | IPR023214 | - | |
Vra7g0332 | 1198 | Gene3D | - | 112 | 287 | - | - | |
Vra7g0332 | 1198 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE | 1 | 1194 | - | - | |
Vra7g0332 | 1198 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 53 | 1144 | IPR023298 | - | |
Vra7g0332 | 1198 | SFLD | p-type atpase | 408 | 917 | IPR044492 | - | |
Vra7g0332 | 1198 | TIGRFAM | ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase | 55 | 1151 | IPR006539 | GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326 | |
Vra7g0332 | 1198 | SUPERFAMILY | HAD-like | 419 | 921 | IPR036412 | - | |
Vra7g0332 | 1198 | Pfam | Phospholipid-translocating ATPase N-terminal | 41 | 104 | IPR032631 | - | |
Vra7g0332 | 1198 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 426 | 432 | IPR018303 | - | |
Vra7g0332 | 1198 | SUPERFAMILY | Calcium ATPase, transduction domain A | 142 | 283 | IPR008250 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra7g0332 | Vra-Chr7 | 5145721 | 5153216 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra7g0332 | 1 | 1192 | Primary Pumps ATPases | AT1G68710 | 73.611 | 0.0 | 1883 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra7g0332 | K01530 | - | gmx:100781421 | 2178.29 |