Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0316 ATGGAGTCTGACAAGAACGAACGTGAGACGAGTCGCGAGGTTTGCGCGAATGGAAATAGCATCAATGCGGCAGAACTTGAGGCCAAACTTGATGCAGGAAATGTTCAAGAAGCAGAAACAACATTGCGTGATGGGTTGTCACTAAGTTCTGAGGAAGCAAAGGCTGTTCTTGGAAAATTAGAGTATCAAAGAGGTAACGTGGAAAATGCTCTTCAAGTGTTTGATGGAATTGATCTTCAACCAATCATACAACAATTACAAACTTCCCTTTCGGAAAAAGGACCAGTGAAGAATGCTTTGTTGTTTGAAGTCGTCTACCTAAGAATCAAGTGTCTACAAAAGTTGGACAAATGTACTGAAGCTATTGATGAGTGTAAGTCTGTTCTTGATGCTGTTGAGAAGACATATGGTCAGGGTACATTTGATACACAAGTCGACAATAAATCGCAGGAGATAGCCAGTCGTGTAGTGGAGCTCCTTCCAGAGCTCTGGAAACAGGTTGGTCGTTATGATGAGGCATTGTCTGCTTATAGGAATGCCCTACTTAGCCAATGGAACCTTGATAATGAATTTGTTGCAAGAATTCAGAAGGCACTTGCTGTGTTTTTGTTGTACAGTGAAGTGGAGGCAAGTCCACCTAACAAGACGGATGGGTCTTATGTACCCAAAAGCAATCTGGAAGAGGCAATTCTTCTTTTAATGATTATTTTGAGAAACTTCATCCTTGGTAAGATAAAGTGGGATCCTTCAGTTATGGAACACCTGGCTTTCACACTTTCAACATGTGGACAAACCTCTATTTTAGCAAAGCAATTTGAAGAGTTGATACCTGGTGTATACCACCGCATTGATCGTTGGAATTTTATAGCCATGTGTAATTGTGTTGCTGGAGAAAATAAAAGTGCTTTGAATCTACTTAGGATGTCTTTGCATAAACATGAACGACCAAATGACCTAATAGCATTATTATTGGCTGCCAAAATTTGTAGTGAGGATCCTCATCTTGGTGCTGAGGGAGTAGGTTATGCACAAAGAGTAATCAATAATGCCCGAGGATTAGATGAGCATTTGAAAGGTGTGGGTTTTAGGATGTTGGGACTTTGCCTAGGAAAACAGGCTAGGGTTTGTTCTTCTGACCATGAGAGGTCTAACCTTCAATCCAAAGCTCTACAATCATTGGAGAAGGCAATTAGATTGGAGCAAAACAATGCTGATCTCATTTTTGAATTGGCTATTCAATATGCTATGCACCGAAATTTAACTGTTGCTTTATCTTGCGCTAAACAGTTCTTTGACAAAACTGGTGGCTCTACATTGAAAGGTTGGAGATTGCTTGCTCTAGTTTTGTCTGCACAAAAAAGATTTGCAGAGGCCGAAGTAGTCACTGATGCAGCTGTAGACGAGACTGCAAAGTGGGAGCAAGGGCCATTACTCAGGCTGAAAGCCAAGTTGAAAATCTCCCAATTACGACCCATGGATGCTATTGAAATTTATCGGTACCTTCTTGCATTGGTTCAAGCCCAGAGGAAATCACCTGGGCCACCTAAACAAGGTTCACAGGTTGAGGATGATAAGATAAACGAACTTGAAGTTTGGCATGGTCTGGCAAATTTATATGCCAGCCTTTCTCACTGGAAGGATGCCGAAATTTGTTTGCAAAAGGCGAAAGAATTAAAGGAATACTCACCAGCAACAACACACGCTGAAGGCAAGAACAGATCTTTATCTATTTTGTTCGAAGGTCGTGGGGAACATTTAGAAGCTCTCATTGCTACTTTGAATGCGGTTCTGCTCGAACCAAACTACGTGCCAAGCAAGATCTTGATGGCTTCTTTGATACTGAAAATCGATTTTATTTCTGCTGCACCTGTTGCTAGATGCCTACTTTGTGATGCACTTAGAATAGAACCCACCAACCGCATGGCTTGGTATTACTTGGGATTAACTCACAAGGCTGATGGCCGAATATCTGATGCTGCTGATTGCTTCCAAGCAGCTTCCTTGCTTGAAGAATCTGATCCCATTGAAGGTTTCAGCTCTATGATTTGA 2049 0.4158 MESDKNERETSREVCANGNSINAAELEAKLDAGNVQEAETTLRDGLSLSSEEAKAVLGKLEYQRGNVENALQVFDGIDLQPIIQQLQTSLSEKGPVKNALLFEVVYLRIKCLQKLDKCTEAIDECKSVLDAVEKTYGQGTFDTQVDNKSQEIASRVVELLPELWKQVGRYDEALSAYRNALLSQWNLDNEFVARIQKALAVFLLYSEVEASPPNKTDGSYVPKSNLEEAILLLMIILRNFILGKIKWDPSVMEHLAFTLSTCGQTSILAKQFEELIPGVYHRIDRWNFIAMCNCVAGENKSALNLLRMSLHKHERPNDLIALLLAAKICSEDPHLGAEGVGYAQRVINNARGLDEHLKGVGFRMLGLCLGKQARVCSSDHERSNLQSKALQSLEKAIRLEQNNADLIFELAIQYAMHRNLTVALSCAKQFFDKTGGSTLKGWRLLALVLSAQKRFAEAEVVTDAAVDETAKWEQGPLLRLKAKLKISQLRPMDAIEIYRYLLALVQAQRKSPGPPKQGSQVEDDKINELEVWHGLANLYASLSHWKDAEICLQKAKELKEYSPATTHAEGKNRSLSILFEGRGEHLEALIATLNAVLLEPNYVPSKILMASLILKIDFISAAPVARCLLCDALRIEPTNRMAWYYLGLTHKADGRISDAADCFQAASLLEESDPIEGFSSMI* 683
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0316 682 Gene3D Tetratricopeptide repeat domain 20 201 IPR011990 GO:0005515
Vra7g0316 682 SUPERFAMILY TPR-like 477 615 IPR011990 GO:0005515
Vra7g0316 682 Gene3D Tetratricopeptide repeat domain 466 675 IPR011990 GO:0005515
Vra7g0316 682 SUPERFAMILY TPR-like 164 424 IPR011990 GO:0005515
Vra7g0316 682 Gene3D Tetratricopeptide repeat domain 220 465 IPR011990 GO:0005515
Vra7g0316 682 SUPERFAMILY TPR-like 386 670 IPR011990 GO:0005515
Vra7g0316 682 PANTHER PROTEIN NPG1 1 681 IPR043376 -
Vra7g0316 682 PANTHER CALMODULIN-BINDING PROTEIN 1 681 - -
Vra7g0316 682 SMART tpr_5 102 135 IPR019734 GO:0005515
Vra7g0316 682 SMART tpr_5 283 316 IPR019734 GO:0005515
Vra7g0316 682 SMART tpr_5 529 562 IPR019734 GO:0005515
Vra7g0316 682 SMART tpr_5 640 673 IPR019734 GO:0005515
Vra7g0316 682 SMART tpr_5 439 472 IPR019734 GO:0005515
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vra7g0316 Vra-Chr7 4954488 4958206 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0316 3 682 Calmodulin-binding Proteins AT2G43040 62.910 0.0 851
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0316 K21843 - gmx:100811897 1036.94