Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0300 ATGGAGTTCACCACTCTGTTGTGCTTCCTTCTTTCTTTCATATCTATTATTCTCCTCAACTTACTCATCAAATCCTTCTCCTTCTTCTTCCCTTCCAAAGTTAATACACAATTGCCGCTTCCTCCTGGGACCATGGGTTGGCCATATATAGGAGAAACCTTCCAAATGTATTCTCAAGACCCAAATGTTTTCTTTGCCACAAAAATCAAGAGGTATGGTTCTATGTTTAAGTCACACATTTTGGGTTATCCTTGTGTGATGATTTCTAACTCGGAAGCAGCAAAGTTTGTGCTCACCAAAGCTCAACTCTTCAAACCAACATTTCCTGATAGCAAAGAGAGGATGTTGGGGAAGCAAGCCATTTTCTTTCACCAAGGAGCATACCATGCTAACCTCAGAAGGCTTGTCCTTCGCACCTTCACCACCGAGGCCATCAAAAATTTAGTCTCTGACATTGAATCCATTGTCCAAAATTGCCTCAAATCATGGGAAGGAAAGTTGATCACCACTTTCCTCGAAATGAAAACGTATACCATCAACGTGGCCCTGCTGTCAATATTTGGAAAAGATGAAAATCTGAATGCAGAGGTTCTGAAGCGATGCTACTACACCCTTGAGAGAGGGTATAACTCAATGCCCATAAACCTTCCCGGAACACTTTTCCACAAAGCCATGAAGGCAAGGAAAGAGCTTGCAGATATCGTGGCTCGAATAATCTCAAAAAGGAGGAAGACGATGCAAGAACACAATGACTTGCTGGGGTCGTTCATGAGTGAAAAAGCAGGACTCACTGATGAACAGATAACAGATAACATCATTGGTGTTATTTTTGCTGCTCGTGACACCACTGCAACAGTACTTACGTGGATTGTTAAGTACCTTGGCGAAAACCCCAGTGTCTTAGAAGCAGCAACGGAAGAGCATGAGTCCATATTAAGGTGCAAAGAAGAAAGTGGAGAAGAAATGGGCCTGAATTGGTCGGACACAAAAAATATGCCTGTGACATCCAGGATCATACAGGAGACTCTAAGAATAGCATCAATTTTGTCTTTTACCTTCAGAGAAGCTATAGAGGATGTTGAATTTCAAGGGTATCTCATACCAAAAGGGTGGAAAGTATTACCACTTTTTAGGAACATCCACCACAGTCCTGACAACTTCAAAGAGCCAGAGAAGTTTGATCCTTCAAGATTTGAGGTGGCTCCAAAACCCAATACTTTTATGCCATTTGGCAATGGGACCCATGCATGTCCTGGCAATGAAATAGCCAAATTGGAGATGTTGGTGCTTCTACATCACCTGATCACAAAGTACAGGTGGTCTACAGTTGGTGCAAAAAATGGGATTCAGTATGGCCCCTTTGCTCTTCCACAAAATGGATTGCCCATCACATTATATCCCAAAAAATAA 1410 0.4213 MEFTTLLCFLLSFISIILLNLLIKSFSFFFPSKVNTQLPLPPGTMGWPYIGETFQMYSQDPNVFFATKIKRYGSMFKSHILGYPCVMISNSEAAKFVLTKAQLFKPTFPDSKERMLGKQAIFFHQGAYHANLRRLVLRTFTTEAIKNLVSDIESIVQNCLKSWEGKLITTFLEMKTYTINVALLSIFGKDENLNAEVLKRCYYTLERGYNSMPINLPGTLFHKAMKARKELADIVARIISKRRKTMQEHNDLLGSFMSEKAGLTDEQITDNIIGVIFAARDTTATVLTWIVKYLGENPSVLEAATEEHESILRCKEESGEEMGLNWSDTKNMPVTSRIIQETLRIASILSFTFREAIEDVEFQGYLIPKGWKVLPLFRNIHHSPDNFKEPEKFDPSRFEVAPKPNTFMPFGNGTHACPGNEIAKLEMLVLLHHLITKYRWSTVGAKNGIQYGPFALPQNGLPITLYPKK* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0300 469 Gene3D Cytochrome P450 31 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0300 469 PANTHER CYTOCHROME P450 26 14 466 - -
Vra7g0300 469 PRINTS P450 superfamily signature 278 295 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0300 469 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0300 469 PRINTS P450 superfamily signature 408 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0300 469 PRINTS P450 superfamily signature 417 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0300 469 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 410 419 IPR017972 GO:0005506|GO:0016705
Vra7g0300 469 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0300 469 PRINTS E-class P450 group I signature 267 284 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0300 469 PRINTS E-class P450 group I signature 287 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0300 469 PRINTS E-class P450 group I signature 336 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0300 469 PRINTS E-class P450 group I signature 376 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0300 469 PRINTS E-class P450 group I signature 407 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0300 469 PRINTS E-class P450 group I signature 417 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0300 469 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 14 466 - -
Vra7g0300 469 SUPERFAMILY Cytochrome P450 37 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g0300 469 Pfam Cytochrome P450 41 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0300 Vra-Chr7 4637437 4640094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0300 14 463 Cytochrome P450 AT4G19230 69.281 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0300 K09843 - gmx:100807446 796.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0917 11 7889832 7892603 Vra7g0300 7 4637437 4640094 PCT