Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0293 ATGGAGAGTGGAAGAATGATCCAATGGTTAAATCTTGTAGTCTGTGTACTGCTACTGCTTAAGGCAGAAGGATCTTTGGTTCCATTGACTTTGGTCGAAAATGCACTGTCGAAAGGAGCTGTTTGTTTGGATGGAAGTCCCCCAGCTTACCACTTTGATAAGGGAGCTGGAGAAGGGATTAACAACTGGATTGTCCACATGGAGGGAGGAGGATGGTGCAAAGATGCCGACGATTGCCTTGGGCGTAAGGACACTCGCTTAGGTTCATCTAACCAAATGGTTGAGGATCTTTACTTTTCTGGAATTTTAGGCAACGACAAAGACTATAATCCTGATTTCTACAACTGGAATAGAGTCAAGATTAGGTACTGTGATGGGTCATCGTTCACTGGTGATGTGGAAGAAGTTGATCCAACAAACAATTTGTACTTCAGAGGAGCAAGGATTTTTTCAGCTGTAATGGACGATTTATTAGCAAAAGGAATGGACAAGGCTGAAAATGCTATTCTCTCCGGCTGTTCAGCTGGAGGATTGACTACTATATTACACTGTGACAATTTTAAAGCTCTGTTACCTTCTGGAGCTAATGTAAAATGTGTTCCAGATGCTGGTTTTTTCATCAATGTAGAGGATATATCAGGAGCACGTTTCATTGAAGACTATTACAGTAAAGTTGTGTCGACACATGGCTCGACAAAGAATTTGCCCTCATCTTGCACTTCCAAACTCAGCCCAGGACTGTGCTTTTTCCCACAATATGTGCTATCACATATCAGTACCCCAATCTTCATAGTAAATTCAGCCTATGACTCATGGCAGATTCGGAACATTTTGGCACCTGGTGCTGCTGATCCCAATGACAGTTGGCATAGCTGCAAGCTTGATTTAAGCAAATGCTCACATGATCAACTAAGTATAGTGCAAGGCTTCAAGAAGGAATTCGAGAAGGCAGTGAGTGTGGTTGGAGACTCTTCATCTAGAGGAATGTTTATAGACTCTTGCTTTGATCACTGTCAAACAGAATCACAGGAAACATGGTTTAAAAGTGACTCACCACATCTTGCCAATACAACAATTGCAAAAGCAGTAGGGGACTGGTTTTATGGTCGAGGTTCTTTCGATCAAATAGATTGCAACTATCCTTGCAACCCCACTTGTCAGAACCTTGTTTCTGATCTAAAAGACCACCCTGGAATATAG 1200 0.4208 MESGRMIQWLNLVVCVLLLLKAEGSLVPLTLVENALSKGAVCLDGSPPAYHFDKGAGEGINNWIVHMEGGGWCKDADDCLGRKDTRLGSSNQMVEDLYFSGILGNDKDYNPDFYNWNRVKIRYCDGSSFTGDVEEVDPTNNLYFRGARIFSAVMDDLLAKGMDKAENAILSGCSAGGLTTILHCDNFKALLPSGANVKCVPDAGFFINVEDISGARFIEDYYSKVVSTHGSTKNLPSSCTSKLSPGLCFFPQYVLSHISTPIFIVNSAYDSWQIRNILAPGAADPNDSWHSCKLDLSKCSHDQLSIVQGFKKEFEKAVSVVGDSSSRGMFIDSCFDHCQTESQETWFKSDSPHLANTTIAKAVGDWFYGRGSFDQIDCNYPCNPTCQNLVSDLKDHPGI* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0293 399 PANTHER NOTUM-RELATED 4 393 IPR004963 GO:0016787
Vra7g0293 399 PANTHER PECTIN ACETYLESTERASE 4 393 - -
Vra7g0293 399 Pfam Pectinacetylesterase 21 371 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0293 Vra-Chr7 4499392 4503049 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0293 5 399 Carbohydrate Esterase AT4G19420 56.744 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0293 K19882 - gmx:100780707 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0934 11 8109834 8115193 Vra7g0293 7 4499392 4503049 PCT