Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0292 ATGGAGACCAGTAGAAAGGGCCAATGGTTAAGTGTGCTGATATGTGTGGTACTATTACTAAAGGCAGAAGGAGTTCCTGTGGGAATCACTTTTGTTGAAAATGCAGTGGCAAAAGGAGCTGTTTGTTTGGATGGGAGTCCACCAGCTTACCACTTCCATAAGGGATCTGGAGCAGGGATTAACAACTGGATTGTTCACTTTGAGGGTGGAGGATGGTGCAACAACGTTACTTCTTGCCTTTCTCGTAGGGACACTCGATTAGGCTCATCTAAAAAAATGGATACCCAACTTTCCTTTTCTGGATTTTTTAGTAACAGTAAAAAGTTCAATCCAGATTTCTACGATTGGAACAGAATCAAGGTTAGGTATTGTGATGGGTCATCATTTACTGGTGATGTTGAAGCTGTTGATCCAGCAACCAATTTGCACTTCAGAGGAGCAAGGGTTTTTGCTGCTGTTGTTGATGATTTACTAGCAAAAGGAATGAAAAATGCTCAAAATGCAATTATCTCTGGATGTTCTGCTGGAGGGTTGGCCGCAATTTTAAACTGTGATCGATTCAAATCACTACTACCTAGAACAACTAAAGTGAAATGCCTTGCAGATGCTGGTTATTTTATCAATGTAAAGGATGTCTCTGGGGCACAGCGCATTGAAGAGTTCTACAGTCAAGTTGTTCAAACACATGGCTCAGCTAAGAATTTGCCTGCATCCTGCACTTCAAGACTCAGACCAGGGCTGTGCTTTTTCCCACAAAATGTGGTATCACAAATCAGTACGCCAATCTTCTTCGTAAATGCAGCCTATGATTCATGGCAGATCAAAAACATTTTGGCACCAGGTGCTGCTGATCCCCATGGCACCTGGCGTGAATGCAAGCTTGATATAAAAAAATGCTCATCAAATCAACTCAGTGCAATGCAAGTATTCAGGACTGATTTCCTGAGGGCATTTGGTGCTGTGGGGAACTCTCCATCAAAAGGGCATTTCATAGATGGTTGCTATGCTCACTGCCAAACTGGAACACAAGAGACATGGTTGAGAAATGACTCTCCTGTGTTAGGCAGCACAACAATTGCGAAGGCAGTTGGAGACTGGTATTATGATCGAAAGCCATTTAAGCAGATAGATTGTGCCTACCCTTGCAACCCCACTTGCCACAATCGTATTTTTGATCAGAATGAGCGTCCAGACGTATAG 1200 0.4292 METSRKGQWLSVLICVVLLLKAEGVPVGITFVENAVAKGAVCLDGSPPAYHFHKGSGAGINNWIVHFEGGGWCNNVTSCLSRRDTRLGSSKKMDTQLSFSGFFSNSKKFNPDFYDWNRIKVRYCDGSSFTGDVEAVDPATNLHFRGARVFAAVVDDLLAKGMKNAQNAIISGCSAGGLAAILNCDRFKSLLPRTTKVKCLADAGYFINVKDVSGAQRIEEFYSQVVQTHGSAKNLPASCTSRLRPGLCFFPQNVVSQISTPIFFVNAAYDSWQIKNILAPGAADPHGTWRECKLDIKKCSSNQLSAMQVFRTDFLRAFGAVGNSPSKGHFIDGCYAHCQTGTQETWLRNDSPVLGSTTIAKAVGDWYYDRKPFKQIDCAYPCNPTCHNRIFDQNERPDV* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0292 399 Pfam Pectinacetylesterase 21 372 IPR004963 GO:0016787
Vra7g0292 399 PANTHER NOTUM-RELATED 4 394 IPR004963 GO:0016787
Vra7g0292 399 SUPERFAMILY alpha/beta-Hydrolases 141 272 IPR029058 -
Vra7g0292 399 PANTHER PECTIN ACETYLESTERASE 4 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0292 Vra-Chr7 4463409 4468360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0292 8 399 Carbohydrate Esterase AT4G19420 59.953 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0292 K19882 - gmx:100781246 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g0292 7 4463409 4468360 Vra11g0934 11 8109834 8115193 PCT