Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0288 ATGCCTACTTCTATGACTAGTTACGATGTGTTTCTGAACTTCAGAGGGGAAGACACTCGTGACAACTTCATTAGTCACCTTTATGCAGCGCTGCAGAGGAAGCACGTTGAAACATATATTGATTATAGACTACAAAGGGGCGAAGAAATTTCACCTGCACTTCAAACTGCAATAGAAGAATCAAAGATCTATGTCCTGGTTTTCTCTGAAAACTATGCATCTTCAACGTGGTGTTTAAATGAACTGACTAAGATACTGGATTGCAAGAAGAGATATGGAAGGAATGTGATACCAGTTTTCTACAAGGTGGATCCAGCAACTGTCAGGAAGCAGGAAGAGAGATACAAAGAAGCATTCCAAGAGCATGAAGAAAGGTTTAAGGAAGACATGGAGAAAGTGCAAGGATGGAAGGATGCTCTAACAGAAGCTGCTGGACTCTCCGGTTGGGATTCAAACGTTATCAGACCAGAACACGCTCTTATTGAAGAAATTATAGAAGATATTTTGAAAAAATTGAATCGTTATTCTGTCAGTTACGATGAAGGAATCATCGGTATTGAAAAACATATTGAAGAAATTCGGTTCTTGTTGCGTCTTGAGTCAACAGATATTCGGATCATAGGAATTTGTGGCATGGGAGGAATAGGAAAGACTACAATTTCTAAGCAATTATATCACACATTGGCAATGCATTTTGATTCTCACAGCCTTGTTTTAGATGTTCAAGAAAAACTAGAAAGAGAGGGAATACAAAATATCAAAAAAAAATATCAGTCTGAGCTTCTAAAGGAAGCACCATCCAATCATTTATCATATTACAATGAACGTCTCAAACGGACAAAGGCCCTCCTCATTCTTGATGATGTGAGCGATTCAACTCTACTTAGCAAATTAATGAGAGTAGGTAGCTTTGGACAGGGCAGTAGAATCATTATGACTAGTAGAGACAGACAAGTGCTTAAGAATGCTGGAACTGATGATATCTACGAACTTAAGGAGTTGAATTTTTATGATTCTCTAAAACTTTTTAATTTACATGCTTTTAGACAAAATTCTTCAAAAGAAATTACTTACATGGACTTGTCAATAAAGGTGTTGAGATATGCAAAAGGGGTTCCGTTAGCTCTCCAAATTTTGGGTTCATTGTTATATGACAGACAAAGAGAAGCATGGGAAAGTCAGTTGCAAAACTTGGACAAGTGTCAAGATCATCATCTTTTCAACGTATTAAAATTAAGCTATGATGGGCTCCGTGAGGAGGAGAAGAATATATTTCTTGACATCGCTTGCTTTTATAGAGGACACAACGAGATTGTGGTAGCAGAAACACTAAGCAACTGTTGTTTCTCTTCTAAGATTGGAATGGATGTTCTAAAAGATAAATGCCTCATATCTATCTTGGATGGTAGAATTGTGATGCACGATTTGATACAAGAAATGGGTCGAGAAATTGTTCGTAAAGAGTGTCTTCAGCATCCTGGAAAACGCAGTCGATTGTTCAAGGCTAACGAAATTCATGAGATTTTAAAAAAGAACAAGGGATCAGATGTAATACAATGTATATTACAAGATATAAACGAAATGGAAGAAGTTAAAGTACATGCAAAAGCTTTCAAAAAGATGAGCAATCTTAGAATGCTTATGCTCAATTCTTATCCTAGGCCTTGGTATAATGTGTTTCTTAAATCATCTTTAGTAAGTCTGCCAGACACTTTGAAGATTCTTAATTGGACTGGTTTTCATCAAAAATCTTTGCCACCAAATTTTTGTCCACAAAATCTAGTGAGACTCGAAATGTCAGGCTGTCATCTTGAACAACTGTGGGAAGAAGATCAGGTTTTTCACGTTATTTATGTACCTTTGTGCCTTTTTCACATTATTCGTTTTGATATTGCTTTTATTAGAATTCCACAATTGTACATATATAGTTTACCAAAGTTGAAAAGGCTCAACCTGAGTTATTCTAAGAAACTTACTAGAATACAAGACCTTTCCCTGTCACCAAATATTGAAGAAATAATTCTCAATGATTGTCCAAAGTTGATTAAAGTTCACTCTTCCATATTACTCACCAAGCTCAGTTTTTTACGTTTAGATAGATGTCATAATCTCAAAAGTGTAACAATTCCCGGCAATATTCTATCCAGATCACCAGGATTCATTCTTCTTTTCTCTTGTTTCAAGCTTGAAATGTTTTCAACCAGTGTACCCAGATTCCCTCATATGAAACTCGAGCGTCAACATGGAACTTTCTCAAGATCCCCTCATAAGAAACCGGAGTATCAACCTGCAACTTTTTCAAGTTTCCCTCGTTTCAAACAGCACTTTCACGGACGTAGAGCTTTCCGAAGATCCTCCGTTAGGGATGGTCTGGGTGAACTTGATACTTTCTCAGGATCTTCTGTGGATAGGAACTATGTTTCTAATTCTTTCTCAAGAATACCCTTTCTGAGTGAAATTTTCTCAATTATTTTTATGAGATATGAGGAAGAAGAAAAAGAAGTGACTAATAATAATATATACGTACATGATGAAAGGCCGATACAACTCACTGGAGGTGTGCCCTTAAACTTTCACAGTCTCAAGAACCTCTGTTTCATAGATCTCTCAAACTGTTCTTCCCTTACAGTATTTCCATTTGACCTTTCTCAGATTAAATTCCTAAAAAAACTTCGTCTCAGTGGTTGCTCAAAATTGGAAAATTTCCCCGAGATTGAGAACACCATGGAAGATTTAGCGGTTCTCCTCTTAGATGCCACAGCCATACAGGCACTACCTTCATCCTTGTGGCGTTTGGTAGGGCTTCAAGAACTGAGTTTGAGTAGGTGCAGGAATCTTGAGATTATTCCATCTTGCATTGGAAGGCTCACCAGACTATGCAAGTTAGACCTTACCTACTGTCAATCACTTCAAACTTTTCCAAGCACCATTTTCAAATTGAAGTTGAGGAAACTTGATTTGTGTGGTTGCTTAAAGCTGAGGACCTTCCCAGAGATCATGGAGCCGGCACAAACTTTTGCTCACATAAACTTAAGAGCAACGACTATCAAAGAACTGCCTTCTTCATTTGGCAATTTGGTTATGCTTCGATCCCTGAAGCTCTATAATTGTTCTGATCTCGAGTCACTTCCAAACTCCATTGTTAATCTAAAGCGTCTCTGTAAACTTGATTGTTCCGGGTGTGCCAAATTAACAGAAATCCCAACACACATTGGTCGCTTATCTTCGTTAATGGAAATGTCACTGAAAAAGAGTGGAATCGTGAACCTTCCCGAGAGCATGGCTCATCTTTCAGGCTTGAAATCGCTTGATTTAAGCGATTGCAAAAAGCTTGAATGCATTCCACATGTTCCCCCATTCCTAAAACAACTGGTGGCATTGGATTGCACATCCATTAGAAGAGTGATGCCAAATTCTCTTGTTCGAAACCTCTCAGAGTCGAAGGAGGATGTCTTCAAATTTCATTTCACCAATGCCCAACAACTTGATTCAGGTGCTCGTGCTAACATTGAGGAGGATGCAAGGCTCAGGATGACCGACGATGCATATGAGTCTGTATGCTTCTGTTTTCCAGGGAGTGCAGTTCCTCATTGGTTCCCTTTTCGCAACGAAGGAGCTTCAGTGAGTATAAATGAAGATTTAAGTTTCTGCAGCGATGACAGGCTCATTGGTTTCGCGTTGTGTGTGGTTTTTGGAGTGTTAGATACGAATGATATTAAAGGCAAACGCGGTTCTTTTGGTTACAGCCTAAAATTTGAATGTGATGATGATGGCACACAGATAATTCCAAATAATGATGTGTTAAAAAACTATTTCACATGGGTTTATAGTCACAGAGTCCTTGATAAAGACCACATATTCATGTGGAAATTTAACTTGGAGAGTCTAAGGAGGAGCGGCATGAACCTTAGGCTCAGTGATGCTCGCAGCTTCACTTTTGAGATCAGTCCATATAATTATAACTTTCGGTGGCCAGATTACGACTCAGTTGTGACAATAAAAGAATGTGAAATGTGTCCTCTTTATAACAGCCGAAGCAATGTTGCAGAGTCTTCAAGCTAA 4062 0.3831 MPTSMTSYDVFLNFRGEDTRDNFISHLYAALQRKHVETYIDYRLQRGEEISPALQTAIEESKIYVLVFSENYASSTWCLNELTKILDCKKRYGRNVIPVFYKVDPATVRKQEERYKEAFQEHEERFKEDMEKVQGWKDALTEAAGLSGWDSNVIRPEHALIEEIIEDILKKLNRYSVSYDEGIIGIEKHIEEIRFLLRLESTDIRIIGICGMGGIGKTTISKQLYHTLAMHFDSHSLVLDVQEKLEREGIQNIKKKYQSELLKEAPSNHLSYYNERLKRTKALLILDDVSDSTLLSKLMRVGSFGQGSRIIMTSRDRQVLKNAGTDDIYELKELNFYDSLKLFNLHAFRQNSSKEITYMDLSIKVLRYAKGVPLALQILGSLLYDRQREAWESQLQNLDKCQDHHLFNVLKLSYDGLREEEKNIFLDIACFYRGHNEIVVAETLSNCCFSSKIGMDVLKDKCLISILDGRIVMHDLIQEMGREIVRKECLQHPGKRSRLFKANEIHEILKKNKGSDVIQCILQDINEMEEVKVHAKAFKKMSNLRMLMLNSYPRPWYNVFLKSSLVSLPDTLKILNWTGFHQKSLPPNFCPQNLVRLEMSGCHLEQLWEEDQVFHVIYVPLCLFHIIRFDIAFIRIPQLYIYSLPKLKRLNLSYSKKLTRIQDLSLSPNIEEIILNDCPKLIKVHSSILLTKLSFLRLDRCHNLKSVTIPGNILSRSPGFILLFSCFKLEMFSTSVPRFPHMKLERQHGTFSRSPHKKPEYQPATFSSFPRFKQHFHGRRAFRRSSVRDGLGELDTFSGSSVDRNYVSNSFSRIPFLSEIFSIIFMRYEEEEKEVTNNNIYVHDERPIQLTGGVPLNFHSLKNLCFIDLSNCSSLTVFPFDLSQIKFLKKLRLSGCSKLENFPEIENTMEDLAVLLLDATAIQALPSSLWRLVGLQELSLSRCRNLEIIPSCIGRLTRLCKLDLTYCQSLQTFPSTIFKLKLRKLDLCGCLKLRTFPEIMEPAQTFAHINLRATTIKELPSSFGNLVMLRSLKLYNCSDLESLPNSIVNLKRLCKLDCSGCAKLTEIPTHIGRLSSLMEMSLKKSGIVNLPESMAHLSGLKSLDLSDCKKLECIPHVPPFLKQLVALDCTSIRRVMPNSLVRNLSESKEDVFKFHFTNAQQLDSGARANIEEDARLRMTDDAYESVCFCFPGSAVPHWFPFRNEGASVSINEDLSFCSDDRLIGFALCVVFGVLDTNDIKGKRGSFGYSLKFECDDDGTQIIPNNDVLKNYFTWVYSHRVLDKDHIFMWKFNLESLRRSGMNLRLSDARSFTFEISPYNYNFRWPDYDSVVTIKECEMCPLYNSRSNVAESSS* 1354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0288 1353 Gene3D Ribonuclease Inhibitor 500 733 IPR032675 -
Vra7g0288 1353 Gene3D - 334 418 IPR042197 -
Vra7g0288 1353 Pfam NB-ARC domain 187 401 IPR002182 GO:0043531
Vra7g0288 1353 SUPERFAMILY L domain-like 836 1132 - -
Vra7g0288 1353 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 428 IPR027417 -
Vra7g0288 1353 Gene3D Ribonuclease Inhibitor 1005 1147 IPR032675 -
Vra7g0288 1353 Pfam TIR domain 8 176 IPR000157 GO:0007165
Vra7g0288 1353 PRINTS Disease resistance protein signature 206 221 - -
Vra7g0288 1353 PRINTS Disease resistance protein signature 276 290 - -
Vra7g0288 1353 PRINTS Disease resistance protein signature 369 383 - -
Vra7g0288 1353 PRINTS Disease resistance protein signature 859 875 - -
Vra7g0288 1353 Gene3D - 178 328 IPR027417 -
Vra7g0288 1353 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 658 719 - -
Vra7g0288 1353 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 935 1160 - -
Vra7g0288 1353 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 860 951 - -
Vra7g0288 1353 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 8 661 - -
Vra7g0288 1353 Gene3D - 5 177 IPR035897 -
Vra7g0288 1353 Gene3D Ribonuclease Inhibitor 835 1004 IPR032675 -
Vra7g0288 1353 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 658 719 IPR044974 GO:0006952
Vra7g0288 1353 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 935 1160 IPR044974 GO:0006952
Vra7g0288 1353 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 661 IPR044974 GO:0006952
Vra7g0288 1353 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 860 951 IPR044974 GO:0006952
Vra7g0288 1353 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 149 IPR035897 -
Vra7g0288 1353 ProSiteProfiles TIR domain profile. 6 172 IPR000157 GO:0007165
Vra7g0288 1353 SUPERFAMILY "Winged helix" DNA-binding domain 406 510 IPR036390 -
Vra7g0288 1353 SMART till_3 7 146 IPR000157 GO:0007165
Vra7g0288 1353 Pfam C-JID domain 1190 1344 IPR045344 -
Vra7g0288 1353 SUPERFAMILY L domain-like 472 728 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0288 Vra-Chr7 4389867 4394422 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0288 3 737 WRKY Transcription Factor Family AT4G12020 31.867 3.05e-82 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0288 - - var:108318722 2120.12