Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0266 ATGGCTACACTGTTGAGAAAACTATGCGAATCCGCGTCGCTCAAGCGATCGGGTTCCAATCCGAACCCGAATCCGAACCCATCATCGGAACGCGCGCCATCTCCTCTGGGCGCCTTCGACACTCTCCCCGCCGACATACTCATGCAAATCGTGCGACTCGTGGGCCCCAAACACGCCGCCAGACTCAGCCTCCTCAGCAAGTCGTGGCGATCTCTTGTCTCCGACAACGACCTCTGGGTGCACTTTCTCCACACCCACCACCCTCACTCGGCGCTCTTCGCAGAAACCGCTCTCAGCTCCGGCTACCCTCTTCCGACCTTATCTGCTCAGAGCTCGCCACGTGGCTCGCTCCAGCATGTTTATGCCCTCCGTGAACGCCTCCCTCCGTCCGTTGTTATCGACGGGGGTTCTGGCTATTGCAAATTCGGTTGGAGCAAAGGCTCTTCTCCTTCTGGGCGATTCGCGACCTTTCTGGAATTTGGTAACGTTGAAACACCCATGTATACTAGACTTCGACATTTTTTCGGAACTATCTATAACAGGATGCAGGTGAAACCAAGTTCTCAACCAGCTGTTGTTTCTATACCAATTTGTCACTATGATGATACTGAATCAGCCAAGGCATCAAGACAGCAGCTTAAAGAAGCAATCTATGCTGCCCTGTTTGACATGAATGTTCCTGCTGTTTGTGCTCTCAATCAGGGGACTTTAGCTCTGTATGCTTCAAAACAAACTTCTGGGATTGCTGTTAATATAGGCTTTCAAGTGACATCCATTGTTCCAATTTTAAATGGTAAAGTGATGCGAAAAGTGGGTGTGGAAGTTGTGGGGCTGGGGGCACTAAAGCTTACTGGATTTCTTAGAAAACAAATGCAAGAGAACAACATAAGTTTTGAATCTTTATACACTGTCCGCACTCTGAAAGAGAAGTTATGTTATGTTGCTGCTGACTATGAAGCTGAGCTATTGAAAGATACAAAAGCATCATTTGAAGCTGTAGAAGGGTTGTTTACACTCTCAAAAGAGCGGTTTCAAACAGGGGAGATATTATTCCAGCCACGACTTGCTGGGGTGCGAGCAATGGGTTTGCATCAGGCCATCGCACTTTGTATGGATCACTGCTATTCTGCAGAATTAGCAGTTAACAACGATTGGTACAAGACTGTTGTCTTATCAGGGGGAACTGCCTGTTTACCTGGTTTAGCAGAAAGGTTAGAAAAGGAGCTTCATTCGGCACTTCCTCCATATATATCCAATGGAATTAGAGTCATACCTCCTCCATTCGGCGTGGATACTGCATGGTTTGGTGGAACGATTATTGGCAGTTTGAGCACCTTTCCTGGTCCATGGTGTACCACAAAAAAGCAATTCCGTCAGAAGTCTAAACTTAACCGCATTTGGTGA 1404 0.4758 MATLLRKLCESASLKRSGSNPNPNPNPSSERAPSPLGAFDTLPADILMQIVRLVGPKHAARLSLLSKSWRSLVSDNDLWVHFLHTHHPHSALFAETALSSGYPLPTLSAQSSPRGSLQHVYALRERLPPSVVIDGGSGYCKFGWSKGSSPSGRFATFLEFGNVETPMYTRLRHFFGTIYNRMQVKPSSQPAVVSIPICHYDDTESAKASRQQLKEAIYAALFDMNVPAVCALNQGTLALYASKQTSGIAVNIGFQVTSIVPILNGKVMRKVGVEVVGLGALKLTGFLRKQMQENNISFESLYTVRTLKEKLCYVAADYEAELLKDTKASFEAVEGLFTLSKERFQTGEILFQPRLAGVRAMGLHQAIALCMDHCYSAELAVNNDWYKTVVLSGGTACLPGLAERLEKELHSALPPYISNGIRVIPPPFGVDTAWFGGTIIGSLSTFPGPWCTTKKQFRQKSKLNRIW* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0266 467 Gene3D Actin; Chain A, domain 4 278 360 - -
Vra7g0266 467 PANTHER MACRONUCLEAR ACTIN 83 458 - -
Vra7g0266 467 SMART fbox_2 42 82 IPR001810 GO:0005515
Vra7g0266 467 SUPERFAMILY F-box domain 25 105 IPR036047 GO:0005515
Vra7g0266 467 Pfam F-box domain 40 80 IPR001810 GO:0005515
Vra7g0266 467 SUPERFAMILY Actin-like ATPase domain 245 454 IPR043129 -
Vra7g0266 467 PANTHER ACTIN 83 458 IPR004000 -
Vra7g0266 467 MobiDBLite consensus disorder prediction 13 35 - -
Vra7g0266 467 Gene3D - 131 459 - -
Vra7g0266 467 Gene3D - 37 82 - -
Vra7g0266 467 SMART actin_3 128 457 IPR004000 -
Vra7g0266 467 ProSiteProfiles F-box domain profile. 36 82 IPR001810 GO:0005515
Vra7g0266 467 SUPERFAMILY Actin-like ATPase domain 129 250 IPR043129 -
Vra7g0266 467 CDD NBD_sugar-kinase_HSP70_actin 131 275 - -
Vra7g0266 467 Gene3D - 235 432 - -
Vra7g0266 467 Pfam Actin 179 453 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0266 Vra-Chr7 4089408 4099518 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0266 177 450 Cytoskeleton Gene Families AT3G12110 34.507 5.39e-42 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0266 K16616 - gmx:100804254 849.736