Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0256 ATGGGTAGTAGTGACATGGACAAAACCCCGAAGGAGAAGGAGTCTAAGACCCCTCCAGCTACGTCACAGGAGCAGTCTCCAACAACTGGCATTAATCCTGACTGGTCTAACTTTCAGACATATTCTCCCATACCTCCACACAGTTTCTTAGCATCAAGTCCCCAAGCCCACCCATTTATGTGGGGTGTCCAGCATGTTATGCCTCCCTATGGCACCCCACCACATCCCTATGTAGCAATGTATCCCCATGGTGGCATTTATGCCCATCCATCCATTCCTCCGGGCTCTTATCCTTTCAGTCCTTTTGCCATGGCTTCTCCAAATGGTATTGCAGATTCTTCGGGAAATAACCCAGGCAGCATTGAAGTTGGTGCTAAACCTCCTGAGGTGAAGGAAAAATTACCCGTCAAAAGATCAAAAGGAAGTGCTAGTGGGGGTAGTTTGAATATGTGGATTACTGGAAAAAATAGTGAACTTGGTAAAACAAACGGAGAATCTGCTAATGGGATTCATTCCAAGAGTGGTGATAGTGCAAGTGACGGAACTAGTGAAGGAAGTGGTGAGAATTCCCAGAATGATTCTCAATTGAAATCCGGGGAGAGGCAGGACTCTTTTGAAGATGAACCATCTCAAAATGGAAGTTCGGCTCCACAAAATGGGGTACATAGTAGACCTCAGACACTTGTTAACCAAACTATGCCTGCCATACCTATATCTACTGCAAGTGCTCCCGGAGCAATTCCTGGTCCCACAACTAATTTAAATATAGGAATGGATTACTGGGGCACGCCAACTTCATCCGCCATTCCTGCACTGCATGGAAAGGTTTCTTCTACTGCAGTTGCTGGGGGGATGATTACTGCTGGGTCAAGAGATGGTGTTCAGCCACAAATTTGGCTACAGGACGAAAGAGAGCTTAAAAGACAAAGGCGGAAGCAGTCTAATAGAGAATCCGCACGCAGATCCAGGTTACGGAAGCAGGCTGAATGCGATGAACTAGCTCAGCGTGCTGACGTTTTGAAAGAAGAAAATGCCACTCTCCAAGCAGAAGTAAGCAGGATCAGGAGTGAGTACGAGCAACTACTTTCTGAGAACGCTTCTCTCAAGGAGAGACTTGGGGAGATACCTGGTGTTGCTACGCCTGGGAACGAGGATGTTAGGTCTGGCCAGAATGATCAGCATGTTACTAATGACACTCAACAAAGTCGTCAGAAGGAGGCTATGCAGGGTGTTCATTAG 1239 0.4689 MGSSDMDKTPKEKESKTPPATSQEQSPTTGINPDWSNFQTYSPIPPHSFLASSPQAHPFMWGVQHVMPPYGTPPHPYVAMYPHGGIYAHPSIPPGSYPFSPFAMASPNGIADSSGNNPGSIEVGAKPPEVKEKLPVKRSKGSASGGSLNMWITGKNSELGKTNGESANGIHSKSGDSASDGTSEGSGENSQNDSQLKSGERQDSFEDEPSQNGSSAPQNGVHSRPQTLVNQTMPAIPISTASAPGAIPGPTTNLNIGMDYWGTPTSSAIPALHGKVSSTAVAGGMITAGSRDGVQPQIWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRADVLKEENATLQAEVSRIRSEYEQLLSENASLKERLGEIPGVATPGNEDVRSGQNDQHVTNDTQQSRQKEAMQGVH* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0256 412 MobiDBLite consensus disorder prediction 1 40 - -
Vra7g0256 412 Pfam G-box binding protein MFMR 1 93 IPR012900 -
Vra7g0256 412 SMART brlzneu 303 367 IPR004827 GO:0003700|GO:0006355
Vra7g0256 412 MobiDBLite consensus disorder prediction 368 412 - -
Vra7g0256 412 CDD bZIP_plant_GBF1 308 358 IPR045314 GO:0003700|GO:0006355
Vra7g0256 412 Pfam bZIP transcription factor 303 365 IPR004827 GO:0003700|GO:0006355
Vra7g0256 412 MobiDBLite consensus disorder prediction 19 40 - -
Vra7g0256 412 Coils Coil 323 371 - -
Vra7g0256 412 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 305 368 IPR004827 GO:0003700|GO:0006355
Vra7g0256 412 PANTHER BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN 1 412 - -
Vra7g0256 412 MobiDBLite consensus disorder prediction 110 224 - -
Vra7g0256 412 MobiDBLite consensus disorder prediction 305 328 - -
Vra7g0256 412 MobiDBLite consensus disorder prediction 1 18 - -
Vra7g0256 412 Pfam Disordered region downstream of MFMR 132 270 - -
Vra7g0256 412 Gene3D - 306 360 - -
Vra7g0256 412 MobiDBLite consensus disorder prediction 384 412 - -
Vra7g0256 412 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 412 IPR044827 GO:0003700|GO:0006355|GO:0043565
Vra7g0256 412 MobiDBLite consensus disorder prediction 208 224 - -
Vra7g0256 412 MobiDBLite consensus disorder prediction 142 198 - -
Vra7g0256 412 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 310 325 IPR004827 GO:0003700|GO:0006355
Vra7g0256 412 SUPERFAMILY Leucine zipper domain 306 362 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0256 Vra-Chr7 3911347 3918322 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0256 1 376 bZIP Transcription Factor Family AT2G35530 61.183 1.04e-152 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vra7g0256 MFMR_assoc 1.1e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0256 K09060 - gmx:100101912 732.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1029 11 9335409 9346679 Vra7g0256 7 3911347 3918322 PCT