Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0234 ATGACCCTGCAAGCTGATTCAGCAGGAGCAGCACCATCACCTGATTCCGCAAACGGCATCGTCCCCAACTTAGAAGAAACCCCACAGTCCCAGCCACAGCCACAGTCTCCGCCTAGTCCGCAACCGTCCCTTTCCAGGCCACCGCCAGAACTGTGTATACCAATATGGTGGCCGGAAGATGGAAATCTCAGCATGGATTGGGTGGAGAACCTGATGCTGTGCTTCGATTGGTCTTCGCGGAATCTTCCTCCGTCGGAGTTACCTTCCGTTCTCCCCGTCAAAGTCTTCGACTCTCTCATCCTCATCGCCTCCAAGATGCTTCACAAGGAACCCAATTGCGTCACTATAGACCCCTTTCGCCCTAGCCCCAACGATAACTCTCCATCCGCCGCCTCTGTCGTTGTCGTGGGCGATGTTCATGGACAACTCCATGATCTTCTTTTCCTTCTCAAAGATGCTGGTTTCCCCTCCCGAGATCGAATCTTTGTCTTTAACGGGGATTACGTGGATCGAGGAGCATGGGGCCTCGAAACCTTCTTGATGTTGTTGGCTTGGAAGGTATTCATGCCACATAACATATATCTGCTACGAGGGAATCATGAATCAAAATACTGTACCTCGGTTTATGGTTTTGAGAAAGAAGTAATGGTAAAGTATGGTGATAAAGGTAAGCATGTGTACCGGAAATGTTTGGGGTGCTTTGAAGGTCTTCCTTTGGCTTCTATTATAGCAGGGTGTGTATACACTGCTCATGGAGGACTTTTCCGCAGTGTAACTGTGATGCCGTCAAAGAGGTTTAAAGGAAAGAAGAACCGTAAGATTAATGTCAATCATGACAGCAAAACTCTGTCTCTTGGTTCCTTGGAAGAATTGTCTAAGGCTCGACGATCAGTTCTTGATCCTCCTTGGGAAGGTCCAAATTTGATTCCTGGTGATGTTTTGTGGTCTGATCCATCAAAAAATCCAGGTCTTGCTCCAAATAAAGAAAGAGGCATTGGCTTGTTGTGGGGTCCTGATTGTACTGAAGAATTTTTGAAGAAGTACCAACTAAAGTTGATCATCAGATCACATGAAGGCCCTGATGCTAGGGAGAAAAGGGATGGTCTAGATGGAATGGATGAAGGTTACACCATTGACCATACTGTAGATTCGGGAAAGCTGGTCACTGTGTTTAGTGCACCAGATTACCCACAGTTTCAGGCAACAGAGAAGAGGTATAACAACAAAGGTTCCTATGTTGTCCTTGAACCACCGAATTTTGACAATCCTATATTTCATGGATTTTCAGCAGTTACTCCCAGGCCGAAGGTAAATGCCTATTACGATTACGAAGAGGTGATAGACTCGGATGAAGAATTGGACTTGGCATCCATGGTAACTTCCTGA 1386 0.4646 MTLQADSAGAAPSPDSANGIVPNLEETPQSQPQPQSPPSPQPSLSRPPPELCIPIWWPEDGNLSMDWVENLMLCFDWSSRNLPPSELPSVLPVKVFDSLILIASKMLHKEPNCVTIDPFRPSPNDNSPSAASVVVVGDVHGQLHDLLFLLKDAGFPSRDRIFVFNGDYVDRGAWGLETFLMLLAWKVFMPHNIYLLRGNHESKYCTSVYGFEKEVMVKYGDKGKHVYRKCLGCFEGLPLASIIAGCVYTAHGGLFRSVTVMPSKRFKGKKNRKINVNHDSKTLSLGSLEELSKARRSVLDPPWEGPNLIPGDVLWSDPSKNPGLAPNKERGIGLLWGPDCTEEFLKKYQLKLIIRSHEGPDAREKRDGLDGMDEGYTIDHTVDSGKLVTVFSAPDYPQFQATEKRYNNKGSYVVLEPPNFDNPIFHGFSAVTPRPKVNAYYDYEEVIDSDEELDLASMVTS* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0234 461 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 37 458 - -
Vra7g0234 461 SUPERFAMILY Metallo-dependent phosphatases 88 436 IPR029052 -
Vra7g0234 461 MobiDBLite consensus disorder prediction 1 46 - -
Vra7g0234 461 PRINTS Serine/threonine phosphatase family signature 132 159 IPR006186 GO:0016787
Vra7g0234 461 PRINTS Serine/threonine phosphatase family signature 162 189 IPR006186 GO:0016787
Vra7g0234 461 PRINTS Serine/threonine phosphatase family signature 195 219 IPR006186 GO:0016787
Vra7g0234 461 PRINTS Serine/threonine phosphatase family signature 232 258 IPR006186 GO:0016787
Vra7g0234 461 PRINTS Serine/threonine phosphatase family signature 292 319 IPR006186 GO:0016787
Vra7g0234 461 PRINTS Serine/threonine phosphatase family signature 386 402 IPR006186 GO:0016787
Vra7g0234 461 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 7 37 458 - -
Vra7g0234 461 ProSitePatterns Serine/threonine specific protein phosphatases signature. 196 201 IPR006186 GO:0016787
Vra7g0234 461 Gene3D - 86 452 IPR029052 -
Vra7g0234 461 MobiDBLite consensus disorder prediction 31 46 - -
Vra7g0234 461 SMART pp2a_7 91 435 IPR006186 GO:0016787
Vra7g0234 461 CDD MPP_PP7 57 442 IPR041754 -
Vra7g0234 461 Pfam Calcineurin-like phosphoesterase 132 360 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0234 Vra-Chr7 3601339 3607333 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0234 54 352 Calmodulin-binding Proteins AT5G63870 71.333 1.86e-156 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0234 K04460 - gmx:100810695 814.298