Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0224 AGAATCTCAGAATCTATAGCAGAATATGTAGCTCGTACTCCTACCCTTTCAGATGATGGAGCAGTGACACTTGGATCTAAAAGAAGCACTTTGTTTGAAGTTGATGCTAAAACTGGATCAATCATTCAAGTCCATGCGATGCCTGATCCTGTTAAACCTTGGAGTGATGGGAGGCAAAATGTTACAAATATCCCCAACATATATAATAGGGATATAGCTGATCCTGTGAAACTTAATTCACCACAGCTGCTGCTTAAGATTTTTAGGACAGATTATTCCCTTCAATCTGTTAGTCCGAGCTCAGAAATAGTTTTGTGGACTATGGCCTTAGCTGAATTTCAGGCTGTATTATTATGCCAACATTCCTCTTCTGATATAGAGGATGAGTATGTTTCTGATAGTGGCCTCAATTTCACAATGCCATACCCCTGTCAAGAGATACGACAAGTCTTCCGCCTGAAAAAGAATTTTCTATTTGAACCTTCTCTAATGCTTCCTTTGCAGCCAAATATTGATAGATTATTCAATGGTGATGATGATAATATGATGCTCTCTCAACCTCTCATCAAGGTTACTACACCAAGGGAAGTTTATTTGAACAGGACAATTGAATGGCCAACTCCATTACCTCTTGTATTGTTTACCATCTTTCTGTTGGCAATTTCACTCATCTATACTCTAGTGATTAAGGATCAAGAAACACCGAAGGACCAAAATAGTGAGTCTGAATTACAAAGTTCACCTGCTAAGAAAAAGAAAACACATAAATCAGGAAGGAAAAATGACATTATTGATAAAAGGGAGGATCATATGTCTTCAGAGGATGGGAAGGTTCTGGCAGAAAAAGATAATGATAGAGAAGTATGGAAGCACTTCAATCATGTTAATGAAAATGTTGATGGACGAAGAATTGGTAAAATATTTGTTTCGAACAAAGAGATTGCTAAGGGAAGCAATGGCACCATTGTGCTTGAGGGTATATACGAAGGTCGAGCAGTTGCTATCAAACGTCTTGTCAAGGCTCACAATGACATAAGTTTTAAAGAAATAAATAACCTTATCATGTCTGATTTTCATCCAAATATTGTTCGATGGCATGGTGTGGAGTACGATAACGATTTTGTTTACCTTGCTTTGGAACGATGTACATGCAATTTAGATGATTTGGTTCAAATTTATTCAGATATATCAGTAAACTCTACGTTTAGGAAGGACCAAGGTATTGGATGTTTGATTAAGTCCCAAATAGATATTGGGAAGGATAGTACACAGTGTCTTTGGAAGGAAAATGGCTATCCATCTCCTCTATTACTAAAACTGATGAGGGACATTGTTTCCGGGGTCATTCATTTGCATGAATTAGGAATAATACATCGAGATATGAAACCACAAAATGTTCTAATAACCAAGGAAAGATCCTTATGTTCTAAACTTTCTGATATGGGAATTAGCAAATGTCTTCTTGAAAATATGTCTTCTCTGGGTAATAATGCAACTGGTGGTGGCAGTTCAGGTTGGCAAGCACCAGAACAACTTGTTCAAGGACGTCAAACACGGGCAGTAGATATATTCAGTTTAGGTTGCGTCTTCTTTTTCTGCATTACTGGGGGAAGACATCCATTTGGAGAACGTATTGAACGGGATATCAATATTTTGAACAATCACATGGACCTTTTCTTGGTGGAGTTCATTCCCGAAGCCAAAGATCTTATTAGTCGTTTACTGAATCCTTACCCTGATCTAAGGCCAAAAGCGACTGAAGTATTGTACCATCCTTTTTTCTGGAATTCCGAGAAGCGGCTTTCCTTTTTGCGTGACACCAGTGATAGGGTGGAAGTGGAAAATAGAGAGACTAATTCTGATCTTTTGGTCACATTAGAAAGCATTGCCACAGATGCCTTGGGTGGAAAATGGGATGAAAGGATGGAACCAGCTTTCATTGCTAACATCAGTCATTATAGGCGGTATAATTTCAACAGTGTTCGAGACTTGTTGCGAGTTATGAGAAACAAACTAAATCATTACAGAGAATTGCCTCAAGAAATCCAGGAACTTGTAGGACCTGTTCCCGAAGGATTCTACGAATATTTTGCAAATAGATATCCAAGACTCTTGATTGAGGTGTATAAAGTTATACTGCATTATTGCAAGGAGGAAGAATGTTTCCAAAGATATTTTAGATGTGTTGATTAG 2193 0.3794 RISESIAEYVARTPTLSDDGAVTLGSKRSTLFEVDAKTGSIIQVHAMPDPVKPWSDGRQNVTNIPNIYNRDIADPVKLNSPQLLLKIFRTDYSLQSVSPSSEIVLWTMALAEFQAVLLCQHSSSDIEDEYVSDSGLNFTMPYPCQEIRQVFRLKKNFLFEPSLMLPLQPNIDRLFNGDDDNMMLSQPLIKVTTPREVYLNRTIEWPTPLPLVLFTIFLLAISLIYTLVIKDQETPKDQNSESELQSSPAKKKKTHKSGRKNDIIDKREDHMSSEDGKVLAEKDNDREVWKHFNHVNENVDGRRIGKIFVSNKEIAKGSNGTIVLEGIYEGRAVAIKRLVKAHNDISFKEINNLIMSDFHPNIVRWHGVEYDNDFVYLALERCTCNLDDLVQIYSDISVNSTFRKDQGIGCLIKSQIDIGKDSTQCLWKENGYPSPLLLKLMRDIVSGVIHLHELGIIHRDMKPQNVLITKERSLCSKLSDMGISKCLLENMSSLGNNATGGGSSGWQAPEQLVQGRQTRAVDIFSLGCVFFFCITGGRHPFGERIERDINILNNHMDLFLVEFIPEAKDLISRLLNPYPDLRPKATEVLYHPFFWNSEKRLSFLRDTSDRVEVENRETNSDLLVTLESIATDALGGKWDERMEPAFIANISHYRRYNFNSVRDLLRVMRNKLNHYRELPQEIQELVGPVPEGFYEYFANRYPRLLIEVYKVILHYCKEEECFQRYFRCVD* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0224 730 SUPERFAMILY Protein kinase-like (PK-like) 308 599 IPR011009 -
Vra7g0224 730 Gene3D Phosphorylase Kinase; domain 1 273 380 - -
Vra7g0224 730 ProSiteProfiles KEN domain profile. 597 728 IPR010513 GO:0004540|GO:0006397
Vra7g0224 730 Pfam Protein kinase domain 310 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g0224 730 MobiDBLite consensus disorder prediction 235 277 - -
Vra7g0224 730 ProSiteProfiles Protein kinase domain profile. 308 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g0224 730 CDD RNase_Ire1 598 726 - -
Vra7g0224 730 MobiDBLite consensus disorder prediction 258 277 - -
Vra7g0224 730 SMART PGNneu 659 713 - -
Vra7g0224 730 Gene3D Transferase(Phosphotransferase) domain 1 420 596 - -
Vra7g0224 730 Gene3D KEN domain 597 729 IPR038357 -
Vra7g0224 730 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Vra7g0224 730 Pfam Ribonuclease 2-5A 600 726 IPR010513 GO:0004540|GO:0006397
Vra7g0224 730 SMART serkin_6 308 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g0224 730 PANTHER SERINE/THREONINE KINASE DOMAIN PROTEIN 162 726 - -
Vra7g0224 730 PANTHER SERINE/THREONINE KINASE DOMAIN PROTEIN 1 162 - -
Vra7g0224 730 PANTHER IRE1-RELATED 162 726 IPR045133 GO:0004521|GO:0004674|GO:0030968
Vra7g0224 730 PANTHER IRE1-RELATED 1 162 IPR045133 GO:0004521|GO:0004674|GO:0030968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0224 Vra-Chr7 3349754 3405526 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0224 330 593 MAP Kinase Kinase Kinase AT3G06030 26.786 2.94e-20 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Vra7g0224 Pkinase 1.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0224 K08852 - gmx:100788389 1228.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0872 11 7354406 7361089 Vra7g0224 7 3349754 3405526 PCT