Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0209 ATGTGCTCATGGGTTTTCAATGTGGCAGGAAATCATACCACGGAGTCACTTTCTTGGAACACCCGACTTAAAATAGCTAAAGGTGCAGTTCGGGGATTAGCTTTCTTGCATGCCAACGAAAATAAAGTCATATTCAGAGATTTCAATACCTCAAATATACTTCTCGACGAGAATTACGATGCAAAAATATCAGATTTTGGCATAGCTAAATTGGAACCATCAGAGGGACAATCACATGTAACTACCAAGCTCATGGGCACCTATGGTTATGCTGCTCCAGAATATGTTATTAGAGGGAAATTGTATGTGAAGAGTGACGTGTATGGATTTGGTGTAGTGCTTCTTGAAATACTCACAGGCTTGAGGGCACATGACAGAAGAAGGCCAACAGGGCAGGAAGACCTGGTTGATTGGACAATACCTTGTTTCTCTTCTAAAGAGAAGTTGAAAAGCATTATGGATGGACGGATAAAGGATCAAATTTCACCCATGGCTGCATTAGAATCAGCACAACTTATTATGAAATGCCTAGTGCATGCCCCTGTACTACGTCCTTCAATGGAACAAGTACTTGAGGGATTGGACGCCATTCAACATATCCATTCGTGA 609 0.4154 MCSWVFNVAGNHTTESLSWNTRLKIAKGAVRGLAFLHANENKVIFRDFNTSNILLDENYDAKISDFGIAKLEPSEGQSHVTTKLMGTYGYAAPEYVIRGKLYVKSDVYGFGVVLLEILTGLRAHDRRRPTGQEDLVDWTIPCFSSKEKLKSIMDGRIKDQISPMAALESAQLIMKCLVHAPVLRPSMEQVLEGLDAIQHIHS* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0209 202 PANTHER OS01G0588500 PROTEIN-RELATED 13 201 - -
Vra7g0209 202 PANTHER SERINE/THREONINE-PROTEIN KINASE CX32, CHLOROPLASTIC-RELATED 13 201 - -
Vra7g0209 202 ProSiteProfiles Protein kinase domain profile. 1 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g0209 202 SUPERFAMILY Protein kinase-like (PK-like) 13 192 IPR011009 -
Vra7g0209 202 Pfam Protein kinase domain 17 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g0209 202 Gene3D Transferase(Phosphotransferase) domain 1 5 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0209 Vra-Chr7 3126758 3128731 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0209 17 200 Receptor kinase-like Gene Family AT4G02010 44.324 4.08e-52 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Vra7g0209 Pkinase 1.3e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0209 - - vra:106765946 408.297