Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0208 ATGGGTCTCTGCTTCTCCGGTGTTCAATCACTCCATTCCTCTAGACTCAACCGCCCTCACTATCCAGGTGCATCAGATATTCACGGCAGCAACTTCGAATTCTCCGAAACCACCACAGCCACCGAGATCAGAAAGAGTCAGTTTAACGTGAGAGAAACCATCTACAGCGATTGCTCTCCTCTTCCTTTTTCCCATGGCCAAATTCTGAAATGGCCCGAGTTGAAGGTGTTCAGTTTTGAGGAGCTGAAATCTGCCACAGGGAATTTTAAATCCGACAGATTGCTCGGTGAAGGTGGGTTTGGCAGAGTTTACAAGGCATGGTTGGATGAGAACACCCTCACCCCCGCCAAACCAGGCTCTGGAGTTGAAGTTGCCATCAAAATGTTCAAACCGGGAGGAAATCATGAACCACTTTCGTGGAACACCCGGCTTAAAATAATTATCGGTGCAGCTCGGGGATTATCTTTCTTGCATGCCAACGAAAATAAGATCATATTCAGAGATTTCAAGAGCTCAAATATACTGCTCGACAGGAATTACAATGCAAAAATAGCAGACTTTGGGTTAGCTAGATTGGGACCATCTGAGGGAGAATCACATGTAAGTACCAAGGTCGTGGGCACCCTTGGTTATCTTGACCCAGAATATTACCTAACAGGGCAGGTGAATGTGAAGAGTGATGTGTATGGATTTGGTGTAGTGCTTCTTGAAATACTAACAGGCATGAAGGCACATGACACAAGAAGGCCAACAGGGCAGCAGAACCTAGTTCGATGGAGCAAGCCCTGTCTCTCTTCCGAAAAAAAGTTGAAAACAATTATGGATGGTAAGATAGAGGGTCAATATTCACCCAAAGCTGCATTACAAGCAGCACAACTTGCTCTAAAATGTCTAGAGGATGATTCTAATCAACGTCCTTCAATGAAAGAAGTTCTTGAGGGATTGGAAGCCATTGAAGATAACCATTGA 969 0.4489 MGLCFSGVQSLHSSRLNRPHYPGASDIHGSNFEFSETTTATEIRKSQFNVRETIYSDCSPLPFSHGQILKWPELKVFSFEELKSATGNFKSDRLLGEGGFGRVYKAWLDENTLTPAKPGSGVEVAIKMFKPGGNHEPLSWNTRLKIIIGAARGLSFLHANENKIIFRDFKSSNILLDRNYNAKIADFGLARLGPSEGESHVSTKVVGTLGYLDPEYYLTGQVNVKSDVYGFGVVLLEILTGMKAHDTRRPTGQQNLVRWSKPCLSSEKKLKTIMDGKIEGQYSPKAALQAAQLALKCLEDDSNQRPSMKEVLEGLEAIEDNH* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0208 322 Gene3D Transferase(Phosphotransferase) domain 1 129 322 - -
Vra7g0208 322 ProSiteProfiles Protein kinase domain profile. 1 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g0208 322 PANTHER OS01G0588500 PROTEIN-RELATED 128 319 - -
Vra7g0208 322 PANTHER OS01G0588500 PROTEIN-RELATED 57 131 - -
Vra7g0208 322 PANTHER SERINE/THREONINE-KINASE CX32, RELATED PROTEIN 57 131 - -
Vra7g0208 322 PANTHER SERINE/THREONINE-KINASE CX32, RELATED PROTEIN 128 319 - -
Vra7g0208 322 SUPERFAMILY Protein kinase-like (PK-like) 64 313 IPR011009 -
Vra7g0208 322 Pfam Protein kinase domain 144 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g0208 322 Gene3D Phosphorylase Kinase; domain 1 74 128 - -
Vra7g0208 322 ProSitePatterns Protein kinases ATP-binding region signature. 95 127 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0208 Vra-Chr7 3118717 3121071 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0208 75 319 Receptor kinase-like Gene Family AT4G02010 40.476 4.58e-68 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Vra7g0208 Pkinase 1.9e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0208 - - vra:106765952 329.717