Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0207 ATGGGTCTCTGCTTCTCGGGTGCTCCATCACTCCATTCCTCTTCACTCAATCGCCCTCACTATCCAGGTGCATCAGACATTCACGGTAGCAACGTCGAATTCTCCGAAACCACCACAACTACTGAGATCAGAAAGCGCCAGTTTTCCGTGAGAGAAAGCATTTACAGCGATTACTCTCCTCTTCCTTTTACCCATGGTCAAATTCTAAAATGGCCTGAGTTGAAGGTGTTCAGTTTTGAGGAGCTGAAATCTGCCACAAGGAATTTTATGTCCGACAGATTGGTCGGTGAAGGCGAGTTTTGCAGAGTTTACAAGGGATGGTTGGATGAGAACACCCTCACCCCCGCCACACCAGGCTCTGGAGTTGAAGTTGCCATCAAAATGTTCAACCCGGAATGTGATCACGGGTTTTCACAGTGGCAGTCTGAGGTAAACTTTTTAGGAAGGCTTTCTCAGCCCAACGTGATCAGGTTACTGGGATACTGTTGGGACGAGGATCAGTTTCTTCTTGTGTATGATGAGTTCATGCCAAACGGAAGCCTCGAGTGTCATCTCTTCGAAACAAGAAATCATAGCACGGAGCCACTTTCTTGGAACACCCCGCTTAAAATAGCTAAGGGTGCAGCTCGGGGATTAGCTTTCTTGCACGCCAACGAAAATAAAGTCATATTCAGAGATTTCAATACCTCAAATATACTTCTCGACGAGAATTACGATGCAAAAATATCAGATTTTGGCATAGCTAAATTGGGACCATCAGAGGGACAATCACATGTAACTACCAAGCTCATGGGCACCTATGGTTATGCTGCTCCAGAATATGTTATTAGAGGGAAGTTGTATGTGAAGAGTGATGTGTATGGATTTGGTGTGGTGCTTCTTGAAATACTGACAGGCTTGAGGGCACATGACAGAAGAAGGCCAACAGGGAAGGAGGACCTGGTTGATTGGACAATACCTTGTTTCTCAGAGAAGTTGAAAAGCATTATGGATGGAAGGATAAAGGATCAAATTTCACCCATGGCTGCATTAGAATCAGCACAACTTATTATGAAATGCCTAGAGCATATCCCTGAACTACGTCCTTCAATGGAACAAGTACTTCAGGGATTGGACGCTATTCAACATATCCATTCGTGA 1140 0.4482 MGLCFSGAPSLHSSSLNRPHYPGASDIHGSNVEFSETTTTTEIRKRQFSVRESIYSDYSPLPFTHGQILKWPELKVFSFEELKSATRNFMSDRLVGEGEFCRVYKGWLDENTLTPATPGSGVEVAIKMFNPECDHGFSQWQSEVNFLGRLSQPNVIRLLGYCWDEDQFLLVYDEFMPNGSLECHLFETRNHSTEPLSWNTPLKIAKGAARGLAFLHANENKVIFRDFNTSNILLDENYDAKISDFGIAKLGPSEGQSHVTTKLMGTYGYAAPEYVIRGKLYVKSDVYGFGVVLLEILTGLRAHDRRRPTGKEDLVDWTIPCFSEKLKSIMDGRIKDQISPMAALESAQLIMKCLEHIPELRPSMEQVLQGLDAIQHIHS* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0207 379 PANTHER OS01G0588500 PROTEIN-RELATED 49 378 - -
Vra7g0207 379 ProSiteProfiles Protein kinase domain profile. 89 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g0207 379 SUPERFAMILY Protein kinase-like (PK-like) 59 369 IPR011009 -
Vra7g0207 379 Gene3D Phosphorylase Kinase; domain 1 62 173 - -
Vra7g0207 379 Gene3D Transferase(Phosphotransferase) domain 1 176 379 - -
Vra7g0207 379 PANTHER SERINE/THREONINE-PROTEIN KINASE CX32, CHLOROPLASTIC-RELATED 49 378 - -
Vra7g0207 379 Pfam Protein tyrosine and serine/threonine kinase 92 369 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0207 Vra-Chr7 3098985 3101449 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0207 74 371 Receptor kinase-like Gene Family AT3G58690 42.904 1.15e-73 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Vra7g0207 PK_Tyr_Ser-Thr 2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0207 - - gmx:100794193 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0854 11 7196453 7199196 Vra7g0207 7 3098985 3101449 PCT