Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0198 ATGGCAACCTCAACTTCTTGTGATGTTAGTGAAATAAGACATGATGTGTTCATCAGCTTCACAGGCATAGATGTCCGCAGAGGTCTTCTTAGCCATTTGAAAAGAGAATTACATCGCAAACATATTGATGCCTATGCGGATGAGAGACTTGATAAAGGGGGTGAAATATCATCCTCACTTCTCAGAGCAATTGAAGCCTCAAAAATTTTATTGGTCGTATTCTCCAAACACTATGCTTCATCACATTGGTGCCTGGAAGAGCTTGCCAAAATGATTGAATGCATGGAAACAAATAAACAGATTGTTCTACCTGTTTTCTTCGATATAGATCCATCAGAGGTTCGACACCAATATGGAGATTATGGAGATGCTTTAGCTGAACATGAAGAAGAGTTCAAGGAAAACATGCAAATTTGGAGATCAGCTCTGAAAACAGCTGGTTGTTTATCCGGATTTCATTATCCAACAAATTATGAGAATGAATCTGATCTTGTGGAGAAAATTGTGGAAGACATTTCAGTAAAATTGAGCAAGTTTTACCCAAGTGAATCAAATGGTCTTGTTGGAATTGATCAAAACGTTACACAGATTCAGTCGTTACTGCGAGTAGAATCAAATGAAGTTCTTTTTGTTGGAATTTGGGGCATGGGTGGCATAGGTAAGACAACCATTGCTCGTGCTATATTTGATAAATGTTCTCTTCAGTATGATGGCTGCTGTTTCTTCAATGTAAGAGAAGAATCAGAACGGCATGGTATCAGCAATTTACGAGAGAGGCTCATTTATGAACTACTTGAAGGAGAAGGTCTCCATATAAACAAAGCAAGATTCTTCCGTTCTGCTCCACGAATGCTGGGTCGGAAAAAAGTTATGGTAGTGCTTGATGATGTAAATACTTCTGAAGAATTAGGGTATCTGGTCACAAAACCAGTTTGCTTCGGTGCAGGGAGTAGAGTGATAATAACAAGTCGAGATCAGGATGTGCTTATAAGTGGAGGACTTGATCAAATTCATGAGGTCAAGGAAATGAAACCTCTTGATTCTCTCAAGCTCTTCTGTTTGATTGCCTTCAACGAAAGCCAACCCAAAATGGGATATGAAAAACTAACTGAAGAGGTGCTTAAAATCGCCCAGGGCAACCCCTTAGCCTTGAAAGTTTTAGGTGCAGAATTCCATTCCAGAAGTACTATAGACACATGGAAGTGTGCATTAAGAAAATTCAAGAAGTATCCGAATGAGAAAATTCTAAATGCGATAAGATTCAGTTATGATGGACTGCATGAAGTAGAGAAAAAGGCCTTCCTAGACATTGCATTCTTTTTCCAAGAAGACACCAAAGCCTATGTTATAGAGCAACTGGATGCATGGGGACTTCATGGAGCCAGTGGAGTGGAGGTTCTCCAACGAAAAGCTCTTATAACAGTTTCAAATGATAATATAATACAAATGCATGACCTGATACGTCAAATGGGTTGCGAAGTAGTTCGTCAAGAATGTATTACACATCCAGGAAGACGCACCCGATTGAGGGATAAAGAGGATGTATACAGTGTATTGAGGTATGAACTGGGAAGCGATAAGATGGAGGGCATGCAAGTAGACGTGTTTCGAATTAAAGACTTGCCGCTGAAAGTAGGCACTTTTAAAAAGATGCCTTGTCTGAGATTTCTGAAATTTTATCTCCCCGATGATAATATTTTCCTGCCACCAAACCCGGATGGAACGTTATGGTATGAAAAACGTCACTTTCCGTTGCTTTTATCTGCATGGTGCAAAGACCTCATGAGAGTTGCATGTGAGATTCAGATAAAATGTGTCGACTACGTTTATTTTGATGGTTACTCGCATCCTTCCCTAACATCGACGCTAAGAAACCGTGGAAGGGAAATACGATCGTCGACATCGATGTCATTGAACAAACTAACTGGTTCCCTCGGGGATGTTGAATGCTCAGATATACTTGATCAACAATTTAAGATTCTGCCTGATGGGCTACTTTGCCTGAGATCTACTTATTATCTTAAGCTTTCTAAGAAGAGCACGGGGGAAGACAGTGCAAAACCCAAGTTGCACGTTCTGTTTGACGGCTTAAGGTTTTATGAACGAATATCTGTGAGCAAGTTGAAGAACTCCGATATCGAGGGTAATCGGACGTTGTTTCTTTATTTTGCAGGTTTGATCTTTCTATTTTATCCCTTTCTTCTCAAGAGACCTTGGTTTCATTTCCTCTTTTCTTTTCGTTTTGCATTCTTCTGCACTTTATTTTTGTATCTTTTATGGAAAACCATCCTTTGA 2295 0.3965 MATSTSCDVSEIRHDVFISFTGIDVRRGLLSHLKRELHRKHIDAYADERLDKGGEISSSLLRAIEASKILLVVFSKHYASSHWCLEELAKMIECMETNKQIVLPVFFDIDPSEVRHQYGDYGDALAEHEEEFKENMQIWRSALKTAGCLSGFHYPTNYENESDLVEKIVEDISVKLSKFYPSESNGLVGIDQNVTQIQSLLRVESNEVLFVGIWGMGGIGKTTIARAIFDKCSLQYDGCCFFNVREESERHGISNLRERLIYELLEGEGLHINKARFFRSAPRMLGRKKVMVVLDDVNTSEELGYLVTKPVCFGAGSRVIITSRDQDVLISGGLDQIHEVKEMKPLDSLKLFCLIAFNESQPKMGYEKLTEEVLKIAQGNPLALKVLGAEFHSRSTIDTWKCALRKFKKYPNEKILNAIRFSYDGLHEVEKKAFLDIAFFFQEDTKAYVIEQLDAWGLHGASGVEVLQRKALITVSNDNIIQMHDLIRQMGCEVVRQECITHPGRRTRLRDKEDVYSVLRYELGSDKMEGMQVDVFRIKDLPLKVGTFKKMPCLRFLKFYLPDDNIFLPPNPDGTLWYEKRHFPLLLSAWCKDLMRVACEIQIKCVDYVYFDGYSHPSLTSTLRNRGREIRSSTSMSLNKLTGSLGDVECSDILDQQFKILPDGLLCLRSTYYLKLSKKSTGEDSAKPKLHVLFDGLRFYERISVSKLKNSDIEGNRTLFLYFAGLIFLFYPFLLKRPWFHFLFSFRFAFFCTLFLYLLWKTIL* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0198 764 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 11 563 - -
Vra7g0198 764 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 151 IPR035897 -
Vra7g0198 764 Gene3D - 8 176 IPR035897 -
Vra7g0198 764 Pfam TIR domain 14 188 IPR000157 GO:0007165
Vra7g0198 764 SMART till_3 13 149 IPR000157 GO:0007165
Vra7g0198 764 ProSiteProfiles TIR domain profile. 12 176 IPR000157 GO:0007165
Vra7g0198 764 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 563 IPR044974 GO:0006952
Vra7g0198 764 Pfam NB-ARC domain 193 413 IPR002182 GO:0043531
Vra7g0198 764 Gene3D - 343 427 IPR042197 -
Vra7g0198 764 SUPERFAMILY "Winged helix" DNA-binding domain 414 519 IPR036390 -
Vra7g0198 764 PRINTS Disease resistance protein signature 210 225 - -
Vra7g0198 764 PRINTS Disease resistance protein signature 284 298 - -
Vra7g0198 764 PRINTS Disease resistance protein signature 377 391 - -
Vra7g0198 764 PRINTS Disease resistance protein signature 703 719 - -
Vra7g0198 764 Gene3D - 177 333 IPR027417 -
Vra7g0198 764 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 437 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0198 Vra-Chr7 2985769 2988483 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0198 14 560 WRKY Transcription Factor Family AT4G12020 31.964 2.15e-61 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0198 - - gsj:114380997 974.541