Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0197 ATGTCGATCTCAACTTCACCTCACTCACACCTTCTTCACCCAAACCGTAAACGCTTTCTCTCCAACTACCGTATCCACACCACCGCCACCCTTTCCCTCCCCTCTTCGCGCACTTTCAGGCCCATCCAATGCGCATCTACGCCGGCCCAGGCCCAAGACCGCGTCTTCAACTTCGCCGCCGGTCCCGCCACCCTGCCCGAGACCGTACTTCGACGCGCCCAGTCCGAGCTCTACCTCTATGAAGAATCCGGCATGAGCGTCATGGAGATGAGCCACCGTGGCAAGGATTTCATGTTCATACTCGAAAAGGCCGAGGAACATCTACACACCCTCCTGGAAATCCCGCTGGGCTTTTCCGTCTTGTTCCTCCAGGGCGGCGCCACCACCCAGTTCGCAGCCGTGCCGCTCAACCTCTGCACCCCTGACGACCCCGTCGATTACGTTGTCACTGGGTCGTGGAGCGATAAGGCATTCAAGGAGGCCCAGAAATACTGCAAACCCAGTGTGATTTGGTCTGGGAAATCTGGAAAATACACAACGATTCCAGATGTTAGGAGTTTAGAGCAGAACCCAAAAGCTAAGTATTTGCACATTTGTGCAAATGAGACTATTCATGGGGTTGAATACAAGGACTACCCATCTCCAGAGAACCGCGATGGTGTTCTTGTTGCTGATATGTCTTCAAATTTCTGTTCCAAGCCTGTCGATGTGTCAAGGTTTGGTGTCATATATGCTGGTGCCCAGAAGAATGTGGGCCCCTCTGGTGTGACAATTGTGATAGTGAGGGATGATCTGATTGGGCATGCGCAGGGTATTACTCCTGTGATGCTTGATTACAAGATTCATGTTGAGAACGGGTCTCTGTACAACACTCCTCCTTGCTATGGCATTTACATGTGCGGGTTGGTGTTTGAGGAGCTGTTGGAGCAGGGTGGGTTGAAGGAGGTTGAGAAGAAGAATAAGAAGAAAGCTGAGATATTATATAATGCAATTGATGGGAGCAAGGGATTTTATAAGTGTCCGGTGGAGAAGGATGTGAGATCATTGATGAATGTGCCCTTCACGTTAGAGAAGTCAGAGCTTGAGGGAGAGTTTATCAAGGAGGCTGAAAAAGAGAACATGGTTCAGCTGAAGGGACATAGATCTGTTGGTGGCATGAGGGCTTCTATTTACAATGCCATGCCTTTGGCTGGAATTCAGAAATTGGTCGCTTTCATGGAGGACTTCCAAGCCAGACACGATTAG 1245 0.5028 MSISTSPHSHLLHPNRKRFLSNYRIHTTATLSLPSSRTFRPIQCASTPAQAQDRVFNFAAGPATLPETVLRRAQSELYLYEESGMSVMEMSHRGKDFMFILEKAEEHLHTLLEIPLGFSVLFLQGGATTQFAAVPLNLCTPDDPVDYVVTGSWSDKAFKEAQKYCKPSVIWSGKSGKYTTIPDVRSLEQNPKAKYLHICANETIHGVEYKDYPSPENRDGVLVADMSSNFCSKPVDVSRFGVIYAGAQKNVGPSGVTIVIVRDDLIGHAQGITPVMLDYKIHVENGSLYNTPPCYGIYMCGLVFEELLEQGGLKEVEKKNKKKAEILYNAIDGSKGFYKCPVEKDVRSLMNVPFTLEKSELEGEFIKEAEKENMVQLKGHRSVGGMRASIYNAMPLAGIQKLVAFMEDFQARHD* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0197 414 PANTHER PHOSPHOSERINE AMINOTRANSFERASE 7 413 IPR022278 GO:0004648|GO:0006564
Vra7g0197 414 ProSitePatterns Aminotransferases class-V pyridoxal-phosphate attachment site. 240 259 IPR020578 -
Vra7g0197 414 CDD PSAT_like 56 410 IPR022278 GO:0004648|GO:0006564
Vra7g0197 414 TIGRFAM serC_1: phosphoserine transaminase 55 413 IPR022278 GO:0004648|GO:0006564
Vra7g0197 414 Gene3D - 67 309 IPR015421 GO:0003824
Vra7g0197 414 Gene3D Aspartate Aminotransferase, domain 1 310 414 IPR015422 GO:0003824
Vra7g0197 414 SUPERFAMILY PLP-dependent transferases 53 411 IPR015424 -
Vra7g0197 414 Hamap Phosphoserine aminotransferase [serC]. 53 413 IPR022278 GO:0004648|GO:0006564
Vra7g0197 414 Pfam Aminotransferase class-V 55 402 IPR000192 -
Vra7g0197 414 PANTHER PHOSPHOSERINE AMINOTRANSFERASE 1, CHLOROPLASTIC 7 413 - -
Vra7g0197 414 PIRSF SerC 49 414 IPR022278 GO:0004648|GO:0006564
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0197 Vra-Chr7 2977449 2979018 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0197 K00831 - gmx:100795286 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g0197 7 2977449 2979018 Vra11g0846 11 7090866 7092595 PCT