Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0191 ATGAGAGGTTTCCACATCCTTCATCTTGAATTGTCGCTCGGTCAGAATACGAATACGAATTCGAATAGGAATCCGAACCCAGTTGATTGCGTGGATGTTCGGGGTGAGGGTGGAGACGACGGAGGGAAAGCGCCAAGACTGCCTCGGTGGACGAGGCAAGAAATTCTGGTTCTGATACAGGGAAAGAGAGATGCTGAGAACAAATTCAGGAGGGGCCGAACGACCGGATTGCCATTAGGGTCGGGTCAGGTGGAGCCCAAATGGGCATCGGTCTCTTCCTACTGCAGAAAACATGGAGTCAACAGAGGTCCGGTTCAGTGCCGGAAAAGGTGGAGCAATTTGGCCGGAGACTACAAGAAGATCAAAGAATGGGAACCTCAGATAAAAGAGGAGTCGGATTCCTTTTGGGTCGTGAGAAACGATTTAAGGAGAGACCGAAAATTGCCCGGATTTTTTGACAAGGAAGTTTATGATATTCTCGATTCAGGCTCCCAAGGTTCGGCGTTGGCTCTCGCTCTTTCATCGCCTCCTTCAAATGACAGTAACGGTGTGCAAGGACATGCACATGGACATGGACACCAAAAGAGGTTGAAGCCTTCATGGGGAGATGAGAATTACATGAGCAAAGGGCCCCTGATTGTGGAAGAGGCAATAGATGATGAAAAAAGTGATAAAGACCTCGACTTTGAAAGAAACAACGATGGTTGA 708 0.4845 MRGFHILHLELSLGQNTNTNSNRNPNPVDCVDVRGEGGDDGGKAPRLPRWTRQEILVLIQGKRDAENKFRRGRTTGLPLGSGQVEPKWASVSSYCRKHGVNRGPVQCRKRWSNLAGDYKKIKEWEPQIKEESDSFWVVRNDLRRDRKLPGFFDKEVYDILDSGSQGSALALALSSPPSNDSNGVQGHAHGHGHQKRLKPSWGDENYMSKGPLIVEEAIDDEKSDKDLDFERNNDG* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0191 235 ProSiteProfiles Myb-like domain profile. 49 115 IPR001005 -
Vra7g0191 235 Pfam Myb/SANT-like DNA-binding domain 49 131 IPR044822 -
Vra7g0191 235 Gene3D - 50 120 - -
Vra7g0191 235 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 26 173 - -
Vra7g0191 235 MobiDBLite consensus disorder prediction 170 185 - -
Vra7g0191 235 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 26 173 - -
Vra7g0191 235 MobiDBLite consensus disorder prediction 170 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0191 Vra-Chr7 2923547 2924451 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0191 28 123 Trihelix Transcription Factor Family AT1G76890 26.042 1.99e-07 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vra7g0191 Myb_DNA-bind_4 9.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0191 - - vra:106765941 444.506