Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0179 ATGGGTGTGTCGCAAAAATGGTTCAGAATTTTTCGCGGAAGATTCATCATCAGATCATCCAACAAAGACATCATTCTCCCACGCACAAGTATTTGCACTGACGAATGCGAAGAAGCCATACTCAGGAATGAAGACTTCAGTTTCCCTACACCAACACCAACACCTGTTTCTGCAATCACCAAGGAAGATGTTGCCGCCATTAAGATCCAAGCTTTTTTCAGGGGACATCTAGCAAGAAGAGCATATAAAGCATTAAAAGGGCTAGTGAAGGTGCAAGCTTTGGTTCGTGGGGTGTGGGTGAGGAAACAATCACGTATAGCAATGCAGTGTATGCACGCACTCGTACGATTACAAGTCAGGGTTCGTTCAAGGCAGCTACTTGGTAGCTTTGATAAGAAATCAACCATTAACTGA 414 0.4396 MGVSQKWFRIFRGRFIIRSSNKDIILPRTSICTDECEEAILRNEDFSFPTPTPTPVSAITKEDVAAIKIQAFFRGHLARRAYKALKGLVKVQALVRGVWVRKQSRIAMQCMHALVRLQVRVRSRQLLGSFDKKSTIN* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0179 137 Pfam IQ calmodulin-binding motif 89 103 IPR000048 GO:0005515
Vra7g0179 137 Pfam IQ calmodulin-binding motif 65 83 IPR000048 GO:0005515
Vra7g0179 137 ProSiteProfiles IQ motif profile. 62 90 IPR000048 GO:0005515
Vra7g0179 137 PANTHER IQ-DOMAIN 5-RELATED 5 128 - -
Vra7g0179 137 PANTHER OS04G0561100 PROTEIN 5 128 - -
Vra7g0179 137 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 106 IPR027417 -
Vra7g0179 137 ProSiteProfiles IQ motif profile. 86 113 IPR000048 GO:0005515
Vra7g0179 137 Gene3D - 61 113 - -
Vra7g0179 137 SMART iq_5 61 83 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0179 Vra-Chr7 2773798 2774748 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0179 60 128 IQD Protein Family AT3G51380 75.362 1.64e-33 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0179 - - vun:114179724 208.764