Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0172 ATGGCAGAAGTTAGGCTCCTTTCAGCTGTTAGGCACAGGAATGTTATTGGTCTGATTGGATATTGTGAAGAACCAGAACAAGATGGAGCCAAAATACTGGTCTATGAATATGTTCCAAATGGTTCACTGCTTGAGCACATCATGGGAAGCAGAATGAGTTTAAGTTGGAGGCGAAGAGTGAAAATAGCAATAGGAGCAGCAAGAGGCATAGCTTATTTGCATGAAGGTGTGAAGCCAAGCATAATCCACCGTGACATAAAACCAAGTAACATCCTATTAGGGGAAGGTTTTGAGGCTAAGGTTTCGGATTTTGGGTTAGTGAAATCAGGTCCAACTGGTGATCAGTCACATGTGAGCAGCCAGATAAAAGGAACACCAGGGTACCTTGACCCCGCCTATTGTTCAAGCTTTCATTTGACCAAATTCAGTGACGTTTATAGCTTTGGTGTCATACTTTTGCAACTTGTTTCAGCTAGACCTGTGGTGGATTCCACTGATAAACAAAGTAATCAACATATCATTGACTGGGCAAGGCCAAGCATAGAGAAGGGCAGTGTTGAAGAAATCATAGATGCAAATCTACTATGTCAAAGTGAGCCCTGCAATATGGAAGTTATGCTGAAGATGGGGCAACTTGCTTTAAGATGTGTGGTTGAAGAACCAAAACATCGGCCAACAATGACTCAGGTGTGTCAAGAACTAGAGCGAGCCCTCAGCTCATCTGATAGCTTCAACAGCAACAAACAGTCTTCAAAGGGATTCTTTACACCAATTGGTTTATCCCAGCAATCACCCAAGTCTGAATCATATGATTGTTCACAGAGCTTTGTTAGTATTGATGGTGTTGGATTGCAGAAATTCCATGTTGATATGGATAGTTTCTCCTTTAAGAGCACAAACTTAAGGATTTGA 912 0.4178 MAEVRLLSAVRHRNVIGLIGYCEEPEQDGAKILVYEYVPNGSLLEHIMGSRMSLSWRRRVKIAIGAARGIAYLHEGVKPSIIHRDIKPSNILLGEGFEAKVSDFGLVKSGPTGDQSHVSSQIKGTPGYLDPAYCSSFHLTKFSDVYSFGVILLQLVSARPVVDSTDKQSNQHIIDWARPSIEKGSVEEIIDANLLCQSEPCNMEVMLKMGQLALRCVVEEPKHRPTMTQVCQELERALSSSDSFNSNKQSSKGFFTPIGLSQQSPKSESYDCSQSFVSIDGVGLQKFHVDMDSFSFKSTNLRI* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0172 303 Gene3D Transferase(Phosphotransferase) domain 1 39 256 - -
Vra7g0172 303 SMART serkin_6 1 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g0172 303 ProSitePatterns Serine/Threonine protein kinases active-site signature. 81 93 IPR008271 GO:0004672|GO:0006468
Vra7g0172 303 SUPERFAMILY Protein kinase-like (PK-like) 2 234 IPR011009 -
Vra7g0172 303 PANTHER OS01G0750732 PROTEIN 2 275 - -
Vra7g0172 303 ProSiteProfiles Protein kinase domain profile. 1 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g0172 303 Pfam Protein kinase domain 2 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g0172 303 Gene3D Phosphorylase Kinase; domain 1 1 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0172 Vra-Chr7 2678265 2680128 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0172 2 267 Receptor kinase-like Gene Family AT1G30570 42.697 1.76e-66 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Vra7g0172 Pkinase 1.1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0172 - - vra:106765934 601.282