Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0163 ATGCTGTCATCTTCATCAATAAACACAACCACCACCACCTGCAACAGGAACAACCTGAACCACCAAACCCCGACAACCAACAACACTACCAACAACAAAGCCATGGAAGATGTATGGGACGGCATCAACCTCACTTCCTTAAGCGGCCACAACTCCGACACTACCCCCACTTCCAAAGGTGCAAATTTTCAAGACTTTCTAGCTCGACCCTTTAACAGCTTCACTGTGGACACATCTCCGGTGACTGCTCTCACCTTGAGCACGTGCTCTGAGTACCCTCCCCGGCAAAAGGACCTGCAATTGGTGCATAATGCTTCAAAGACCGAACCTTTTGCCCACCCATTTTCAAATAAAAGAGCCCCACCTTCAAGGGACATGCGCGACGCACGACTCATGAAGAATCGCGAATCTGCTGCTCGATCCAGAGCCAGAAAGCAGGCTTACTTGTTTGAGTTGAAGCAAAAAATCAAGCAGTTGCGAGAAGAGAATGCAAGACTCAGAAAACAGCAGCAACTGCAGTTGGGTGAAAGCGCAACGAATGAGTGGAAGAAGGGCAATCTATATCGAACATATACAGCTCCATTTTAA 588 0.4796 MLSSSSINTTTTTCNRNNLNHQTPTTNNTTNNKAMEDVWDGINLTSLSGHNSDTTPTSKGANFQDFLARPFNSFTVDTSPVTALTLSTCSEYPPRQKDLQLVHNASKTEPFAHPFSNKRAPPSRDMRDARLMKNRESAARSRARKQAYLFELKQKIKQLREENARLRKQQQLQLGESATNEWKKGNLYRTYTAPF* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0163 195 Coils Coil 142 176 - -
Vra7g0163 195 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 124 169 IPR004827 GO:0003700|GO:0006355
Vra7g0163 195 Pfam bZIP transcription factor 127 169 IPR004827 GO:0003700|GO:0006355
Vra7g0163 195 Gene3D - 126 176 - -
Vra7g0163 195 SUPERFAMILY Leucine zipper domain 128 174 IPR046347 GO:0003700|GO:0006355
Vra7g0163 195 SMART brlzneu 123 184 IPR004827 GO:0003700|GO:0006355
Vra7g0163 195 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 19 195 IPR043452 GO:0003700|GO:0045893
Vra7g0163 195 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 130 144 IPR004827 GO:0003700|GO:0006355
Vra7g0163 195 CDD bZIP_plant_BZIP46 126 170 - -
Vra7g0163 195 MobiDBLite consensus disorder prediction 1 33 - -
Vra7g0163 195 PANTHER PROTEIN FD 19 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0163 Vra-Chr7 2596882 2598280 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0163 127 195 bZIP Transcription Factor Family AT3G56850 54.286 4.16e-14 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vra7g0163 bZIP_1 3.5e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0163 K14432 - gmx:102667912 203.756